Basic Information:

  VIRBase ID:  

VHID00220432

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:  MIMAT0001575          TYW5:  NR_109905     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-3p	TYW5
miRBase Accession/Entrez ID	MIMAT0001575	129450
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C2orf60//hTYW5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TYW5	chr2:200802164(-) A-I      intronic chr2:200802141(-) A-I      intronic chr2:200806001(-) A-I      intronic chr2:200816481(-) A-I      intronic chr2:200802183(-) A-I      intronic chr2:200802123(-) A-I      intronic chr2:200805871(-) A-I      intronic chr2:200805927(-) A-I      intronic chr2:200805977(-) A-I      intronic chr2:200805254(-) A-I      intronic chr2:200802390(-) A-I      intronic chr2:200802820(-) A-I      intronic chr2:200802893(-) A-I      intronic chr2:200802903(-) A-I      intronic chr2:200802911(-) A-I      intronic chr2:200802920(-) A-I      intronic chr2:200802952(-) A-I      intronic chr2:200802982(-) A-I      intronic chr2:200802990(-) A-I      intronic chr2:200802992(-) A-I      intronic chr2:200803066(-) A-I      intronic chr2:200805119(-) A-I      intronic chr2:200805196(-) A-I      intronic chr2:200805266(-) A-I      intronic chr2:200805290(-) A-I      intronic chr2:200802388(-) A-I      intronic chr2:200818963(-) A-I      intronic chr2:200818996(-) A-I      intronic chr2:200819098(-) A-I      intronic chr2:200802359(-) A-I      intronic chr2:200802280(-) A-I      intronic chr2:200802260(-) A-I      intronic chr2:200802252(-) A-I      intronic chr2:200802203(-) A-I      intronic chr2:200802268(-) A-I      intronic chr2:200805991(-) A-I      intronic chr2:200802223(-) A-I      intronic chr2:200802270(-) A-I      intronic chr2:200802370(-) A-I      intronic chr2:200802284(-) A-I      intronic chr2:200805976(-) A-I      intronic chr2:200805125(-) A-I      intronic chr2:200806039(-) A-I      intronic chr2:200805327(-) A-I      intronic chr2:200803060(-) A-I      intronic chr2:200802165(-) A-I      intronic chr2:200802309(-) A-I      intronic chr2:200803054(-) A-I      intronic chr2:200802138(-) A-I      intronic chr2:200814039(-) A-I      intronic chr2:200802926(-) A-I      intronic chr2:200802848(-) A-I      intronic chr2:200802168(-) A-I      intronic chr2:200803059(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TYW5	chr2:200802135(-) A-I intron -    22327324 chr2:200802276(-) A-I intron -    22327324 chr2:200802348(-) A-I intron -    22327324 chr2:200803054(-) A-I intron -    22327324 chr2:200805125(-) A-I intron -    22327324

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TYW5	chr2:200795003-200795004(-) m6A 3'UTR       27773535 chr2:200795077-200795078(-) m6A 3'UTR       27773535 chr2:200795125-200795126(-) m6A 3'UTR       27773535 chr2:200795145-200795146(-) m6A 3'UTR       27773535 chr2:200796076-200796077(-) m6A 3'UTR//exon       27773535 chr2:200796095-200796096(-) m6A 3'UTR//exon       27773535 chr2:200797460-200797461(-) m6A 3'UTR//exon       27773535 chr2:200797555-200797556(-) m6A 3'UTR//exon       27773535 chr2:200797613-200797614(-) m6A 3'UTR//exon       27773535 chr2:200797799-200797800(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr2:200797817-200797818(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr2:200797853-200797854(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr2:200797884-200797885(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr2:200797898-200797899(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr2:200797940-200797941(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr2:200797956-200797957(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr2:200803666-200803667(-) m6A 3'UTR//CDS//exon       27773535 chr2:200803718-200803719(-) m6A 3'UTR//CDS//exon       27773535 chr2:200813067-200813068(-) m6A CDS//exon//intron       27773535 chr2:200813140-200813141(-) m6A CDS//exon//intron       27773535//27371828 chr2:200813189-200813190(-) m6A CDS//exon//intron       24981863//27773535//27371828 chr2:200820220-200820221(-) m6A 5'UTR//exon       24981863//27371828 chr2:200820290-200820291(-) m6A 5'UTR       25456834//24981863//27371828 chr2:200820323-200820324(-) m6A 5'UTR       25456834//24981863//27371828//27773536 chr2:200820417-200820418(-) m6A 5'UTR       25456834//24981863//27371828//27773536 chr2:200820434-200820435(-) m6A 5'UTR       25456834//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TYW5	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-3p
Interactor2: TYW5

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg