Basic Information:

  VIRBase ID:  

VHID00220301

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:  MIMAT0001575          PLXNA4:  NM_020911     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-3p	PLXNA4
miRBase Accession/Entrez ID	MIMAT0001575	91584
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAYV2820//PLEXA4//PLXNA4A//PLXNA4B//PRO34003

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLXNA4	chr7:131967683(-) A-I      intronic chr7:131944105(-) A-I      intronic chr7:131944087(-) A-I      intronic chr7:131944086(-) A-I      intronic chr7:131938092(-) A-I      intronic chr7:131967834(-) A-I      intronic chr7:132144910(-) A-I      intronic chr7:132144928(-) A-I      intronic chr7:132144930(-) A-I      intronic chr7:131967812(-) A-I      intronic chr7:131967823(-) A-I      intronic chr7:132019089(-) A-I      intronic chr7:131938087(-) A-I      intronic chr7:131938077(-) A-I      intronic chr7:131967833(-) A-I      intronic chr7:131967880(-) A-I      intronic chr7:131967875(-) A-I      intronic chr7:131967857(-) A-I      intronic chr7:131967862(-) A-I      intronic chr7:131967861(-) A-I      intronic chr7:131967871(-) A-I      intronic chr7:131967886(-) A-I      intronic chr7:131967803(-) A-I      intronic chr7:131967843(-) A-I      intronic chr7:131968918(-) A-I      intronic chr7:131969716(-) A-I      intronic chr7:131969749(-) A-I      intronic chr7:132019259(-) A-I      intronic chr7:132019260(-) A-I      intronic chr7:132144909(-) A-I      intronic chr7:131850739(-) A-I      intronic chr7:131981304(-) A-I      intronic chr7:132019218(-) A-I      intronic chr7:131967795(-) A-I      intronic chr7:131967073(-) A-I      intronic chr7:132163920(-) A-I      intronic chr7:131967088(-) A-I      intronic chr7:131967087(-) A-I      intronic chr7:131967248(-) A-I      intronic chr7:131967658(-) A-I      intronic chr7:131969738(-) A-I      intronic chr7:131967678(-) A-I      intronic chr7:132318109(-) A-I      intronic chr7:131968932(-) A-I      intronic chr7:131967166(-) A-I      intronic chr7:132163781(-) A-I      intronic chr7:131967349(-) A-I      intronic chr7:131967297(-) A-I      intronic chr7:131964216(-) A-I      intronic chr7:131968765(-) A-I      intronic chr7:132129737(-) A-I      intronic chr7:131967777(-) A-I      intronic chr7:131967251(-) A-I      intronic chr7:131967848(-) A-I      intronic chr7:131938260(-) A-I      intronic chr7:132132675(-) A-I      intronic chr7:131968717(-) A-I      intronic chr7:132019114(-) A-I      intronic chr7:131964219(-) A-I      intronic chr7:131850821(-) A-I      intronic chr7:132019216(-) A-I      intronic chr7:132129279(-) A-I      intronic chr7:132019128(-) A-I      intronic chr7:131968926(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLXNA4	chr7:131812843-131812844(-) m6A 3'UTR       - chr7:131812942-131812943(-) m6A 3'UTR       24981863 chr7:131813069-131813070(-) m6A 3'UTR       25456834//24981863 chr7:131813104-131813105(-) m6A 3'UTR       25456834//24981863 chr7:131813120-131813121(-) m6A 3'UTR       25456834//24981863 chr7:131813147-131813148(-) m6A 3'UTR       25456834//24981863 chr7:131813155-131813156(-) m6A 3'UTR       25456834//24981863 chr7:131813255-131813256(-) m6A 3'UTR       - chr7:131813708-131813709(-) m6A 3'UTR       - chr7:131813863-131813864(-) m6A 3'UTR       25456834//24981863 chr7:131813907-131813908(-) m6A 3'UTR       25456834//24981863 chr7:131813960-131813961(-) m6A 3'UTR       25456834//24981863 chr7:131813986-131813987(-) m6A 3'UTR       25456834//24981863 chr7:131814072-131814073(-) m6A 3'UTR       25456834//24981863 chr7:131814169-131814170(-) m6A 3'UTR       - chr7:131814763-131814764(-) m6A 3'UTR       25456834 chr7:131814789-131814790(-) m6A 3'UTR       25456834 chr7:131814873-131814874(-) m6A 3'UTR       25456834//24981863 chr7:131814880-131814881(-) m6A 3'UTR       25456834//24981863 chr7:132193018-132193019(-) m6A CDS       - chr7:132193078-132193079(-) m6A CDS       - chr7:132193090-132193091(-) m6A CDS       - chr7:132193145-132193146(-) m6A CDS       - chr7:132193180-132193181(-) m6A CDS       - chr7:132193196-132193197(-) m6A CDS       - chr7:132193269-132193270(-) m6A CDS       25456834 chr7:132193274-132193275(-) m6A CDS       25456834 chr7:132193427-132193428(-) m6A CDS       25456834 chr7:132193432-132193433(-) m6A CDS       25456834 chr7:132193464-132193465(-) m6A 5'UTR       25456834 chr7:132193529-132193530(-) m6A 5'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLXNA4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-3p
Interactor2: PLXNA4

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg