Detail Information

Basic Information:


  VIRBase ID:  

VHID00220249

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:           ZNF514:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL22A-3p ZNF514
miRBase
Accession/Entrez ID		 MIMAT0001575 84874
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF514
chr2:95813579(-) A-I      3'UTR
chr2:95813589(-) A-I      3'UTR
chr2:95813522(-) A-I      3'UTR
chr2:95813548(-) A-I      3'UTR
chr2:95813431(-) A-I      3'UTR
chr2:95813469(-) A-I      3'UTR
chr2:95813610(-) A-I      3'UTR
chr2:95813505(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF514
chr2:95813585(-) A-G exon 3'UTR    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF514
chr2:95813578-95813579(-) m6A exon       24981863
chr2:95813601-95813602(-) m6A exon       24981863
chr2:95813627-95813628(-) m6A exon       24981863
chr2:95813702-95813703(-) m6A 3'UTR//exon       24981863//27773535
chr2:95813713-95813714(-) m6A 3'UTR//exon       24981863//27773535
chr2:95813869-95813870(-) m6A 3'UTR//exon       24981863//27773535
chr2:95813963-95813964(-) m6A 3'UTR//exon       24981863//22608085
chr2:95814008-95814009(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814166-95814167(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814213-95814214(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814222-95814223(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814266-95814267(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814275-95814276(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814337-95814338(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814389-95814390(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814409-95814410(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814419-95814420(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814436-95814437(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814475-95814476(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814576-95814577(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814745-95814746(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814808-95814809(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814835-95814836(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr2:95814922-95814923(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:95814976-95814977(-) m6A 3'UTR//exon       24981863//22608085
chr2:95814987-95814988(-) m6A 3'UTR//exon       24981863//22608085
chr2:95815034-95815035(-) m6A CDS//exon       24981863//22608085
chr2:95815062-95815063(-) m6A CDS//exon       24981863//22608085
chr2:95815119-95815120(-) m6A CDS//exon       24209618//24981863//27773535//22608085
chr2:95815203-95815204(-) m6A CDS//exon       24981863//27773535//27371828//22608085
chr2:95815259-95815260(-) m6A CDS//exon       25456834//24981863//27773535//27371828//22608085
chr2:95815304-95815305(-) m6A CDS//exon       25456834//24981863//27773535//27371828//22608085
chr2:95815371-95815372(-) m6A CDS//exon       24209618//24981863//27773535//22608085
chr2:95815472-95815473(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085
chr2:95815482-95815483(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085
chr2:95815575-95815576(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085
chr2:95815640-95815641(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr2:95815654-95815655(-) m6A CDS//exon       24209618//24981863//27773535//22608085
chr2:95815667-95815668(-) m6A CDS//exon       24209618//24981863//27773535//22608085
chr2:95815824-95815825(-) m6A CDS//exon       24981863//22608085
chr2:95815833-95815834(-) m6A CDS//exon       24981863//22608085
chr2:95815842-95815843(-) m6A CDS//exon       24981863//22608085
chr2:95815923-95815924(-) m6A CDS//exon       24981863//22608085
chr2:95824637-95824638(-) m6A 5'UTR//intron       25456834//24981863//22608085
chr2:95824723-95824724(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085
chr2:95824762-95824763(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085
chr2:95824774-95824775(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085
chr2:95824796-95824797(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085
chr2:95824808-95824809(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085
chr2:95824971-95824972(-) m6A 5'UTR//intron       24209618//25456834//24981863//27371828//27773536
chr2:95825184-95825185(-) m6A 5'UTR//intron       25456834//27371828
chr2:95825196-95825197(-) m6A 5'UTR//intron       25456834//27371828
chr2:95825222-95825223(-) m6A 5'UTR//intron       25456834//24981863//27371828
chr2:95825292-95825293(-) m6A 5'UTR//intron       24209618//25456834//27371828
chr2:95825307-95825308(-) m6A 5'UTR//intron       24209618//25456834//27371828
chr2:95830794-95830795(-) m6A CDS       24209618//24981863//22608085
chr2:95830835-95830836(-) m6A 5'UTR       24209618//25456834//24981863//27371828//22608085
chr2:95830860-95830861(-) m6A 5'UTR       24209618//25456834//24981863//27371828//22608085
chr2:95831060-95831061(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF514
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL22A-3p
Interactor2: ZNF514

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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