Basic Information:

  VIRBase ID:  

VHID00220073

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:  MIMAT0001575          ARMT1:  NM_024573     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-3p	ARMT1
miRBase Accession/Entrez ID	MIMAT0001575	79624
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C6orf211

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARMT1	chr6:151782567(+) A-I      intronic chr6:151782630(+) A-I      intronic chr6:151787315(+) A-I      intronic chr6:151787314(+) A-I      intronic chr6:151782672(+) A-I      intronic chr6:151787123(+) A-I      intronic chr6:151787211(+) A-I      intronic chr6:151787283(+) A-I      intronic chr6:151781315(+) A-I      intronic chr6:151788461(+) A-I      intronic chr6:151787154(+) A-I      intronic chr6:151787193(+) A-I      intronic chr6:151787288(+) A-I      intronic chr6:151781659(+) A-I      intronic chr6:151781804(+) A-I      intronic chr6:151781665(+) A-I      intronic chr6:151788289(+) A-I      intronic chr6:151781798(+) A-I      intronic chr6:151782685(+) A-I      intronic chr6:151781735(+) A-I      intronic chr6:151781710(+) A-I      intronic chr6:151781666(+) A-I      intronic chr6:151781360(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARMT1	chr6:151773645-151773646(+) m6A 5'UTR       24981863 chr6:151773709-151773710(+) m6A 5'UTR//CDS//exon       24981863 chr6:151775708-151775709(+) m6A CDS//exon//intron       24981863 chr6:151775778-151775779(+) m6A CDS//exon//intron       24981863 chr6:151779525-151779526(+) m6A 5'UTR//CDS//exon       24981863 chr6:151789737-151789738(+) m6A CDS       27773535 chr6:151789768-151789769(+) m6A CDS       27773535 chr6:151789824-151789825(+) m6A CDS       27773535 chr6:151789833-151789834(+) m6A CDS       27773535 chr6:151791168-151791169(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARMT1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-3p
Interactor2: ARMT1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg