Detail Information

Basic Information:


  VIRBase ID:  

VHID00219284

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:           ADAM28:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL22A-3p ADAM28
miRBase
Accession/Entrez ID
MIMAT0001575 10863
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - ADAM 28//eMDC II//eMDCII//MDC-L//MDCL

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADAM28
chr8:24162360(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADAM28
chr8:24151599-24151600(+) m6A 5'UTR       24981863
chr8:24151636-24151637(+) m6A 5'UTR       24981863
chr8:24157502-24157503(+) m6A CDS//exon       24981863
chr8:24157544-24157545(+) m6A CDS//exon       24981863
chr8:24211935-24211936(+) m6A 3'UTR       24981863
chr8:24211963-24211964(+) m6A 3'UTR       24981863
chr8:24212056-24212057(+) m6A 3'UTR       24981863
chr8:24212067-24212068(+) m6A 3'UTR       24981863
chr8:24212090-24212091(+) m6A 3'UTR       24981863
chr8:24212104-24212105(+) m6A 3'UTR       24981863
chr8:24212220-24212221(+) m6A 3'UTR       24981863
chr8:24212225-24212226(+) m6A 3'UTR       24981863
chr8:24212233-24212234(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ADAM28
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL22A-3p
Interactor2: ADAM28

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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