Basic Information:

  VIRBase ID:  

VHID00218247

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:  MIMAT0001575          ADA:  NR_136160     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-3p	ADA
miRBase Accession/Entrez ID	MIMAT0001575	100
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADA1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADA	chr20:43257028(-) A-I      intronic chr20:43257023(-) A-I      intronic chr20:43256025(-) A-I      intronic chr20:43256921(-) A-I      intronic chr20:43250153(-) A-I      intronic chr20:43257040(-) A-I      intronic chr20:43268281(-) A-I      intronic chr20:43268192(-) A-I      intronic chr20:43268291(-) A-I      intronic chr20:43268296(-) A-I      intronic chr20:43268333(-) A-I      intronic chr20:43268837(-) A-I      intronic chr20:43273779(-) A-I      intronic chr20:43273789(-) A-I      intronic chr20:43273806(-) A-I      intronic chr20:43256023(-) A-I      intronic chr20:43256027(-) A-I      intronic chr20:43256944(-) A-I      intronic chr20:43261449(-) A-I      intronic chr20:43267142(-) A-I      intronic chr20:43267171(-) A-I      intronic chr20:43268820(-) A-I      intronic chr20:43268186(-) A-I      intronic chr20:43268185(-) A-I      intronic chr20:43268165(-) A-I      intronic chr20:43267172(-) A-I      intronic chr20:43257056(-) A-I      intronic chr20:43256095(-) A-I      intronic chr20:43257115(-) A-I      intronic chr20:43256920(-) A-I      intronic chr20:43255960(-) A-I      intronic chr20:43255890(-) A-I      intronic chr20:43257098(-) A-I      intronic chr20:43258738(-) A-I      intronic chr20:43257020(-) A-I      intronic chr20:43279274(-) A-I      intronic chr20:43256001(-) A-I      intronic chr20:43257009(-) A-I      intronic chr20:43268960(-) A-I      intronic chr20:43257046(-) A-I      intronic chr20:43255852(-) A-I      intronic chr20:43257000(-) A-I      intronic chr20:43276673(-) A-I      intronic chr20:43275994(-) A-I      intronic chr20:43268227(-) A-I      intronic chr20:43261474(-) A-I      intronic chr20:43255961(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ADA	chr20:43255961(-) A-I intron -    22327324 chr20:43256095(-) A-I intron -    22327324 chr20:43256321(-) A-G intron -    22484847 chr20:43255951(-) A-G intron -    22484847 chr20:43255960(-) A-G intron -    22484847 chr20:43255961(-) A-G intron -    22484847 chr20:43256001(-) A-G intron -    22484847 chr20:43256095(-) A-G intron -    22484847 chr20:43261410(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADA	chr20:43248348-43248349(-) m6A 3'UTR//exon       24284625 chr20:43248384-43248385(-) m6A 3'UTR//exon       24284625 chr20:43249216-43249217(-) m6A exon//intron       25456834 chr20:43249477-43249478(-) m6A exon//intron       25456834 chr20:43249506-43249507(-) m6A exon//intron       25456834 chr20:43249524-43249525(-) m6A exon//intron       25456834 chr20:43249539-43249540(-) m6A exon//intron       25456834 chr20:43251551-43251552(-) Cm 3'UTR//CDS//exon       - chr20:43252922-43252923(-) m6A CDS//exon//intron       27371828 chr20:43254259-43254260(-) m6A CDS//exon//intron       27371828//27773536 chr20:43254319-43254320(-) m6A CDS//exon//intron       27371828//27773536 chr20:43254994-43254995(-) m6A exon//intron       27371828//27773536 chr20:43264886-43264887(-) m6A CDS//exon       27371828//27773536 chr20:43264923-43264924(-) m6A CDS//exon       24981863//27371828//27773536 chr20:43280297-43280298(-) m6A 5'UTR//exon//intron       24209618//25456834//24981863//27371828//27773536 chr20:43280803-43280804(-) m6A exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADA	Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-3p
Interactor2: ADA

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg