Basic Information:

  VIRBase ID:  

VHID00218195

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          GTF2H5:  NM_207118     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	GTF2H5
miRBase Accession/Entrez ID	MIMAT0001574	404672
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA120J8.2//C6orf175//TFB5//TFIIH//TGF2H5//TTD//TTD-A//TTD3//TTDA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GTF2H5	chr6:158606421(+) A-I      intronic chr6:158596434(+) A-I      intronic chr6:158606416(+) A-I      intronic chr6:158606420(+) A-I      intronic chr6:158606425(+) A-I      intronic chr6:158606429(+) A-I      intronic chr6:158608156(+) A-I      intronic chr6:158606412(+) A-I      intronic chr6:158608127(+) A-I      intronic chr6:158608182(+) A-I      intronic chr6:158611149(+) A-I      intronic chr6:158593515(+) A-I      intronic chr6:158593512(+) A-I      intronic chr6:158593518(+) A-I      intronic chr6:158593529(+) A-I      intronic chr6:158593541(+) A-I      intronic chr6:158596524(+) A-I      intronic chr6:158596554(+) A-I      intronic chr6:158608160(+) A-I      intronic chr6:158608166(+) A-I      intronic chr6:158608169(+) A-I      intronic chr6:158619604(+) A-I      3'UTR chr6:158619647(+) A-I      3'UTR chr6:158619698(+) A-I      3'UTR chr6:158617156(+) A-I      3'UTR chr6:158617102(+) A-I      3'UTR chr6:158619508(+) A-I      3'UTR chr6:158617203(+) A-I      3'UTR chr6:158617167(+) A-I      3'UTR chr6:158619539(+) A-I      3'UTR chr6:158617110(+) A-I      3'UTR chr6:158614870(+) A-I      3'UTR chr6:158614966(+) A-I      3'UTR chr6:158619675(+) A-I      3'UTR chr6:158619514(+) A-I      3'UTR chr6:158619484(+) A-I      3'UTR chr6:158617050(+) A-I      3'UTR chr6:158617152(+) A-I      3'UTR chr6:158614965(+) A-I      3'UTR chr6:158619576(+) A-I      3'UTR chr6:158619530(+) A-I      3'UTR chr6:158617296(+) A-I      3'UTR chr6:158619528(+) A-I      3'UTR chr6:158619515(+) A-I      3'UTR chr6:158614763(+) A-I      3'UTR chr6:158619656(+) A-I      3'UTR chr6:158614981(+) A-I      3'UTR chr6:158606413(+) A-I      intronic chr6:158608104(+) A-I      intronic chr6:158593427(+) A-I      intronic chr6:158619521(+) A-I      3'UTR chr6:158614815(+) A-I      3'UTR chr6:158619644(+) A-I      3'UTR chr6:158617199(+) A-I      3'UTR chr6:158617135(+) A-I      3'UTR chr6:158619699(+) A-I      3'UTR chr6:158613849(+) A-I      3'UTR chr6:158619620(+) A-I      3'UTR chr6:158614864(+) A-I      3'UTR chr6:158619486(+) A-I      3'UTR chr6:158619712(+) A-I      3'UTR chr6:158619520(+) A-I      3'UTR chr6:158614862(+) A-I      3'UTR chr6:158619592(+) A-I      3'UTR chr6:158617274(+) A-I      3'UTR chr6:158617210(+) A-I      3'UTR chr6:158619700(+) A-I      3'UTR chr6:158619714(+) A-I      3'UTR chr6:158613922(+) A-I      3'UTR chr6:158619485(+) A-I      3'UTR chr6:158619545(+) A-I      3'UTR chr6:158614289(+) A-I      3'UTR chr6:158619612(+) A-I      3'UTR chr6:158614258(+) A-I      3'UTR chr6:158619613(+) A-I      3'UTR chr6:158619489(+) A-I      3'UTR chr6:158606779(+) A-I      intronic chr6:158593466(+) A-I      intronic chr6:158606451(+) A-I      intronic chr6:158606778(+) A-I      intronic chr6:158606762(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GTF2H5	chr6:158619485(+) A-I exon 3'UTR    15342557 chr6:158619489(+) A-I exon 3'UTR    15342557 chr6:158619521(+) A-I exon 3'UTR    15342557 chr6:158619523(+) A-I exon 3'UTR    15342557 chr6:158620285(+) A-I exon 3'UTR    15342557 chr6:158596547(+) A-G intron -    22484847 chr6:158619521(+) A-G intron -    22484847 chr6:158619523(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GTF2H5	chr6:158591520-158591521(+) m6A 5'UTR       24284625//24981863//22608085 chr6:158591533-158591534(+) m6A 5'UTR       24284625//24981863//22608085 chr6:158613082-158613083(+) m6A CDS       24284625//24981863//27773535//22608085 chr6:158613157-158613158(+) m6A CDS       24284625//24981863//27773535//22608085 chr6:158613204-158613205(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr6:158613238-158613239(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr6:158613271-158613272(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr6:158613308-158613309(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr6:158613350-158613351(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr6:158617911-158617912(+) m6A 3'UTR       22608085 chr6:158618029-158618030(+) m6A 3'UTR       22608085 chr6:158618054-158618055(+) m6A 3'UTR       22608085 chr6:158618085-158618086(+) m6A 3'UTR       22608085 chr6:158618135-158618136(+) m6A 3'UTR       22608085 chr6:158618148-158618149(+) m6A 3'UTR       22608085 chr6:158618163-158618164(+) m6A 3'UTR       22608085 chr6:158618175-158618176(+) m6A 3'UTR       22608085 chr6:158618197-158618198(+) m6A 3'UTR       22608085 chr6:158618269-158618270(+) m6A 3'UTR       22608085 chr6:158618359-158618360(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GTF2H5	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: GTF2H5

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg