Basic Information:

  VIRBase ID:  

VHID00218153

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          MYPOP:  NM_001012643     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	MYPOP
miRBase Accession/Entrez ID	MIMAT0001574	339344
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	P42pop

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MYPOP	chr19:46402367(-) A-I      intronic chr19:46402398(-) A-I      intronic chr19:46402906(-) A-I      intronic chr19:46403016(-) A-I      intronic chr19:46399386(-) A-I      intronic chr19:46400264(-) A-I      intronic chr19:46400404(-) A-I      intronic chr19:46401746(-) A-I      intronic chr19:46400432(-) A-I      intronic chr19:46400534(-) A-I      intronic chr19:46401320(-) A-I      intronic chr19:46401706(-) A-I      intronic chr19:46401330(-) A-I      intronic chr19:46401351(-) A-I      intronic chr19:46401657(-) A-I      intronic chr19:46401666(-) A-I      intronic chr19:46396774(-) A-I      intronic chr19:46400403(-) A-I      intronic chr19:46394810(-) A-I      intronic chr19:46396369(-) A-I      intronic chr19:46396655(-) A-I      intronic chr19:46396779(-) A-I      intronic chr19:46396780(-) A-I      intronic chr19:46397550(-) A-I      intronic chr19:46397551(-) A-I      intronic chr19:46398115(-) A-I      intronic chr19:46398150(-) A-I      intronic chr19:46398564(-) A-I      intronic chr19:46398596(-) A-I      intronic chr19:46398609(-) A-I      intronic chr19:46398670(-) A-I      intronic chr19:46398678(-) A-I      intronic chr19:46399377(-) A-I      intronic chr19:46398677(-) A-I      intronic chr19:46401434(-) A-I      intronic chr19:46403011(-) A-I      intronic chr19:46398674(-) A-I      intronic chr19:46394859(-) A-I      intronic chr19:46398628(-) A-I      intronic chr19:46396644(-) A-I      intronic chr19:46397566(-) A-I      intronic chr19:46398062(-) A-I      intronic chr19:46399486(-) A-I      intronic chr19:46400946(-) A-I      intronic chr19:46396571(-) A-I      intronic chr19:46396366(-) A-I      intronic chr19:46396670(-) A-I      intronic chr19:46400910(-) A-I      intronic chr19:46403052(-) A-I      intronic chr19:46400309(-) A-I      intronic chr19:46399425(-) A-I      intronic chr19:46396584(-) A-I      intronic chr19:46402477(-) A-I      intronic chr19:46399522(-) A-I      intronic chr19:46403036(-) A-I      intronic chr19:46400982(-) A-I      intronic chr19:46400868(-) A-I      intronic chr19:46399383(-) A-I      intronic chr19:46401278(-) A-I      intronic chr19:46400980(-) A-I      intronic chr19:46398117(-) A-I      intronic chr19:46397702(-) A-I      intronic chr19:46396623(-) A-I      intronic chr19:46396476(-) A-I      intronic chr19:46401876(-) A-I      intronic chr19:46395468(-) A-I      intronic chr19:46398589(-) A-I      intronic chr19:46402241(-) A-I      intronic chr19:46402986(-) A-I      intronic chr19:46402989(-) A-I      intronic chr19:46397756(-) A-I      intronic chr19:46396527(-) A-I      intronic chr19:46402453(-) A-I      intronic chr19:46402465(-) A-I      intronic chr19:46396275(-) A-I      intronic chr19:46402240(-) A-I      intronic chr19:46399541(-) A-I      intronic chr19:46395361(-) A-I      intronic chr19:46403053(-) A-I      intronic chr19:46402372(-) A-I      intronic chr19:46401827(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MYPOP	chr19:46405269(-) A-I intron -    21960545 chr19:46402986(-) A-G intron -    22484847 chr19:46402989(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MYPOP	chr19:46393296-46393297(-) m6A 3'UTR       27773535 chr19:46393467-46393468(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27773535//22575960//22608085 chr19:46393493-46393494(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr19:46393515-46393516(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085 chr19:46393589-46393590(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr19:46393872-46393873(-) Y 3'UTR       26075521 chr19:46394179-46394180(-) m6A CDS       24284625//25456834//24981863//27371828//27773536 chr19:46394222-46394223(-) m6A CDS       24284625//25456834//24981863//27371828//27773536 chr19:46394231-46394232(-) m6A CDS       24284625//25456834//24981863//27371828//27773536 chr19:46394275-46394276(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536 chr19:46394298-46394299(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536 chr19:46394310-46394311(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536 chr19:46404543-46404544(-) m6A CDS       24284625 chr19:46404688-46404689(-) m6A CDS       27371828//27773536 chr19:46404957-46404958(-) m6A CDS       27371828//27773536 chr19:46404997-46404998(-) m6A CDS       27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MYPOP	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: MYPOP

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg