Basic Information:

  VIRBase ID:  

VHID00218080

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          FBXO41:  NM_001080410     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	FBXO41
miRBase Accession/Entrez ID	MIMAT0001574	150726
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FBX41

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FBXO41	chr2:73509648(-) A-I      intronic chr2:73509659(-) A-I      intronic chr2:73503023(-) A-I      intronic chr2:73503039(-) A-I      intronic chr2:73503090(-) A-I      intronic chr2:73503092(-) A-I      intronic chr2:73503107(-) A-I      intronic chr2:73503308(-) A-I      intronic chr2:73503455(-) A-I      intronic chr2:73503475(-) A-I      intronic chr2:73509242(-) A-I      intronic chr2:73509395(-) A-I      intronic chr2:73490038(-) A-I      intronic chr2:73489990(-) A-I      intronic chr2:73509251(-) A-I      intronic chr2:73509613(-) A-I      intronic chr2:73488300(-) A-I      intronic chr2:73503132(-) A-I      intronic chr2:73502319(-) A-I      intronic chr2:73509745(-) A-I      intronic chr2:73503007(-) A-I      intronic chr2:73488441(-) A-I      intronic chr2:73509190(-) A-I      intronic chr2:73509709(-) A-I      intronic chr2:73503079(-) A-I      intronic chr2:73509323(-) A-I      intronic chr2:73488336(-) A-I      intronic chr2:73509798(-) A-I      intronic chr2:73502403(-) A-I      intronic chr2:73509722(-) A-I      intronic chr2:73509260(-) A-I      intronic chr2:73509599(-) A-I      intronic chr2:73503281(-) A-I      intronic chr2:73509723(-) A-I      intronic chr2:73509736(-) A-I      intronic chr2:73509325(-) A-I      intronic chr2:73502926(-) A-I      intronic chr2:73503052(-) A-I      intronic chr2:73488281(-) A-I      intronic chr2:73488475(-) A-I      intronic chr2:73509731(-) A-I      intronic chr2:73503448(-) A-I      intronic chr2:73503389(-) A-I      intronic chr2:73509628(-) A-I      intronic chr2:73501969(-) A-I      intronic chr2:73509261(-) A-I      intronic chr2:73503085(-) A-I      intronic chr2:73509762(-) A-I      intronic chr2:73488382(-) A-I      intronic chr2:73503372(-) A-I      intronic chr2:73488459(-) A-I      intronic chr2:73509389(-) A-I      intronic chr2:73488383(-) A-I      intronic chr2:73509748(-) A-I      intronic chr2:73509247(-) A-I      intronic chr2:73509394(-) A-I      intronic chr2:73509829(-) A-I      intronic chr2:73502449(-) A-I      intronic chr2:73503017(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FBXO41	chr2:73483880-73483881(-) m6A 3'UTR       - chr2:73484834-73484835(-) m6A 3'UTR       25456834 chr2:73484918-73484919(-) m6A 3'UTR       25456834 chr2:73484961-73484962(-) m6A 3'UTR       25456834 chr2:73484999-73485000(-) m6A 3'UTR       25456834 chr2:73485038-73485039(-) m6A 3'UTR       25456834 chr2:73485295-73485296(-) m6A 3'UTR       27773535 chr2:73485388-73485389(-) m6A 3'UTR       27773535 chr2:73485393-73485394(-) m6A 3'UTR       27773535 chr2:73485412-73485413(-) m6A 3'UTR       27773535 chr2:73485450-73485451(-) m6A 3'UTR       27773535 chr2:73485468-73485469(-) m6A 3'UTR       27773535 chr2:73485481-73485482(-) m6A 3'UTR       27773535 chr2:73485562-73485563(-) m6A 3'UTR       25456834//27371828 chr2:73485612-73485613(-) m6A 3'UTR       25456834//27371828 chr2:73485673-73485674(-) m6A 3'UTR       25456834//27371828 chr2:73485899-73485900(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr2:73485983-73485984(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr2:73486024-73486025(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr2:73486029-73486030(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr2:73486041-73486042(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr2:73486052-73486053(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22575960//22608085 chr2:73486314-73486315(-) m6A CDS       24209618 chr2:73486327-73486328(-) m6A CDS       24209618 chr2:73491102-73491103(-) Am CDS       - chr2:73492496-73492497(-) m6A CDS       27371828//27773536 chr2:73492554-73492555(-) m6A CDS       27371828//27773536 chr2:73492567-73492568(-) m6A CDS       27371828//27773536 chr2:73492672-73492673(-) m6A CDS//exon       25456834//24981863//27371828//27773536 chr2:73493825-73493826(-) m6A exon//intron       25456834//27371828 chr2:73493919-73493920(-) m6A exon//intron       24209618//25456834//27371828//27773536 chr2:73495876-73495877(-) m6A CDS       24209618//25456834//27371828//27773536 chr2:73495892-73495893(-) m6A CDS       24209618//25456834//27371828//27773536 chr2:73496010-73496011(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22608085 chr2:73496017-73496018(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22608085 chr2:73496111-73496112(-) m6A CDS       24209618//25456834//24981863//27371828//27773536 chr2:73496628-73496629(-) m6A CDS       27371828 chr2:73496744-73496745(-) m6A CDS       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FBXO41	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: FBXO41

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg