Detail Information

Basic Information:


  VIRBase ID:  

VHID00218050

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:           ICA1L:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL22A-5p ICA1L
miRBase
Accession/Entrez ID		 MIMAT0001574 130026
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - ALS2CR14//ALS2CR15

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ICA1L
chr2:203686996(-) A-I      intronic
chr2:203723600(-) A-I      intronic
chr2:203660734(-) A-I      intronic
chr2:203650338(-) A-I      intronic
chr2:203723601(-) A-I      intronic
chr2:203650303(-) A-I      intronic
chr2:203650302(-) A-I      intronic
chr2:203650287(-) A-I      intronic
chr2:203732066(-) A-I      intronic
chr2:203686982(-) A-I      intronic
chr2:203730587(-) A-I      intronic
chr2:203730577(-) A-I      intronic
chr2:203730574(-) A-I      intronic
chr2:203730566(-) A-I      intronic
chr2:203730563(-) A-I      intronic
chr2:203730553(-) A-I      intronic
chr2:203729149(-) A-I      intronic
chr2:203729144(-) A-I      intronic
chr2:203729127(-) A-I      intronic
chr2:203729095(-) A-I      intronic
chr2:203700450(-) A-I      intronic
chr2:203723617(-) A-I      intronic
chr2:203687000(-) A-I      intronic
chr2:203700443(-) A-I      intronic
chr2:203730044(-) A-I      intronic
chr2:203729105(-) A-I      intronic
chr2:203729935(-) A-I      intronic
chr2:203729512(-) A-I      intronic
chr2:203729497(-) A-I      intronic
chr2:203727438(-) A-I      intronic
chr2:203727432(-) A-I      intronic
chr2:203712856(-) A-I      intronic
chr2:203710267(-) A-I      intronic
chr2:203710238(-) A-I      intronic
chr2:203710187(-) A-I      intronic
chr2:203710128(-) A-I      intronic
chr2:203710105(-) A-I      intronic
chr2:203704146(-) A-I      intronic
chr2:203700362(-) A-I      intronic
chr2:203700332(-) A-I      intronic
chr2:203699329(-) A-I      intronic
chr2:203691937(-) A-I      intronic
chr2:203694279(-) A-I      intronic
chr2:203699236(-) A-I      intronic
chr2:203727448(-) A-I      intronic
chr2:203649775(-) A-I      intronic
chr2:203729131(-) A-I      intronic
chr2:203689016(-) A-I      intronic
chr2:203689037(-) A-I      intronic
chr2:203689047(-) A-I      intronic
chr2:203699325(-) A-I      intronic
chr2:203649903(-) A-I      intronic
chr2:203649664(-) A-I      intronic
chr2:203649773(-) A-I      intronic
chr2:203649749(-) A-I      intronic
chr2:203730110(-) A-I      intronic
chr2:203649798(-) A-I      intronic
chr2:203642057(-) A-I      3'UTR
chr2:203642048(-) A-I      3'UTR
chr2:203642015(-) A-I      3'UTR
chr2:203700454(-) A-I      intronic
chr2:203647042(-) A-I      intronic
chr2:203663132(-) A-I      intronic
chr2:203646968(-) A-I      intronic
chr2:203708969(-) A-I      intronic
chr2:203690081(-) A-I      intronic
chr2:203729507(-) A-I      intronic
chr2:203692825(-) A-I      intronic
chr2:203699180(-) A-I      intronic
chr2:203724825(-) A-I      intronic
chr2:203668325(-) A-I      intronic
chr2:203728383(-) A-I      intronic
chr2:203699715(-) A-I      intronic
chr2:203724943(-) A-I      intronic
chr2:203692033(-) A-I      intronic
chr2:203691466(-) A-I      intronic
chr2:203691995(-) A-I      intronic
chr2:203692053(-) A-I      intronic
chr2:203687090(-) A-I      intronic
chr2:203724932(-) A-I      intronic
chr2:203687023(-) A-I      intronic
chr2:203660617(-) A-I      intronic
chr2:203667874(-) A-I      intronic
chr2:203692838(-) A-I      intronic
chr2:203676193(-) A-I      intronic
chr2:203664712(-) A-I      intronic
chr2:203660196(-) A-I      intronic
chr2:203649860(-) A-I      intronic
chr2:203711006(-) A-I      intronic
chr2:203689987(-) A-I      intronic
chr2:203730625(-) A-I      intronic
chr2:203692822(-) A-I      intronic
chr2:203706690(-) A-I      intronic
chr2:203709047(-) A-I      intronic
chr2:203649830(-) A-I      intronic
chr2:203729142(-) A-I      intronic
chr2:203700067(-) A-I      intronic
chr2:203664782(-) A-I      intronic
chr2:203700537(-) A-I      intronic
chr2:203692839(-) A-I      intronic
chr2:203689989(-) A-I      intronic
chr2:203694324(-) A-I      intronic
chr2:203703967(-) A-I      intronic
chr2:203701840(-) A-I      intronic
chr2:203711013(-) A-I      intronic
chr2:203691945(-) A-I      intronic
chr2:203699735(-) A-I      intronic
chr2:203687176(-) A-I      intronic
chr2:203726956(-) A-I      intronic
chr2:203699223(-) A-I      intronic
chr2:203686915(-) A-I      intronic
chr2:203641940(-) A-I      3'UTR
chr2:203690189(-) A-I      3'UTR
chr2:203641979(-) A-I      3'UTR
chr2:203642067(-) A-I      3'UTR
chr2:203699682(-) A-I      intronic
chr2:203700300(-) A-I      intronic
chr2:203699320(-) A-I      intronic
chr2:203728418(-) A-I      intronic
chr2:203700155(-) A-I      intronic
chr2:203687009(-) A-I      intronic
chr2:203686987(-) A-I      intronic
chr2:203700040(-) A-I      intronic
chr2:203664809(-) A-I      intronic
chr2:203686953(-) A-I      intronic
chr2:203688882(-) A-I      intronic
chr2:203644608(-) A-I      intronic
chr2:203701661(-) A-I      intronic
chr2:203699268(-) A-I      intronic
chr2:203658435(-) A-I      intronic
chr2:203702867(-) A-I      intronic
chr2:203699677(-) A-I      intronic
chr2:203691271(-) A-I      intronic
chr2:203690098(-) A-I      intronic
chr2:203700442(-) A-I      intronic
chr2:203730029(-) A-I      intronic
chr2:203668326(-) A-I      intronic
chr2:203689092(-) A-I      intronic
chr2:203699626(-) A-I      intronic
chr2:203730070(-) A-I      intronic
chr2:203646052(-) A-I      intronic
chr2:203710129(-) A-I      intronic
chr2:203690020(-) A-I      intronic
chr2:203692948(-) A-I      intronic
chr2:203694301(-) A-I      intronic
chr2:203664738(-) A-I      intronic
chr2:203692887(-) A-I      intronic
chr2:203688961(-) A-I      intronic
chr2:203691228(-) A-I      intronic
chr2:203699674(-) A-I      intronic
chr2:203687086(-) A-I      intronic
chr2:203727068(-) A-I      intronic
chr2:203706649(-) A-I      intronic
chr2:203649699(-) A-I      intronic
chr2:203699275(-) A-I      intronic
chr2:203687138(-) A-I      intronic
chr2:203691969(-) A-I      intronic
chr2:203699256(-) A-I      intronic
chr2:203646985(-) A-I      intronic
chr2:203702850(-) A-I      intronic
chr2:203691413(-) A-I      intronic
chr2:203692949(-) A-I      intronic
chr2:203688976(-) A-I      intronic
chr2:203701753(-) A-I      intronic
chr2:203686914(-) A-I      intronic
chr2:203691925(-) A-I      intronic
chr2:203730617(-) A-I      intronic
chr2:203691374(-) A-I      intronic
chr2:203650353(-) A-I      intronic
chr2:203667926(-) A-I      intronic
chr2:203649804(-) A-I      intronic
chr2:203699630(-) A-I      intronic
chr2:203692927(-) A-I      intronic
chr2:203646903(-) A-I      intronic
chr2:203700546(-) A-I      intronic
chr2:203668523(-) A-I      intronic
chr2:203688932(-) A-I      intronic
chr2:203700545(-) A-I      intronic
chr2:203729576(-) A-I      intronic
chr2:203691287(-) A-I      intronic
chr2:203649778(-) A-I      intronic
chr2:203690085(-) A-I      intronic
chr2:203694302(-) A-I      intronic
chr2:203717137(-) A-I      intronic
chr2:203701702(-) A-I      intronic
chr2:203700552(-) A-I      intronic
chr2:203700348(-) A-I      intronic
chr2:203728996(-) A-I      intronic
chr2:203702231(-) A-I      intronic
chr2:203690133(-) A-I      intronic
chr2:203730080(-) A-I      intronic
chr2:203730629(-) A-I      intronic
chr2:203700472(-) A-I      intronic
chr2:203686977(-) A-I      intronic
chr2:203686947(-) A-I      intronic
chr2:203706850(-) A-I      intronic
chr2:203711088(-) A-I      intronic
chr2:203700408(-) A-I      intronic
chr2:203699208(-) A-I      intronic
chr2:203687049(-) A-I      intronic
chr2:203726902(-) A-I      intronic
chr2:203694242(-) A-I      intronic
chr2:203646053(-) A-I      intronic
chr2:203692816(-) A-I      intronic
chr2:203644643(-) A-I      intronic
chr2:203687129(-) A-I      intronic
chr2:203650307(-) A-I      intronic
chr2:203730549(-) A-I      intronic
chr2:203646092(-) A-I      intronic
chr2:203692796(-) A-I      intronic
chr2:203702267(-) A-I      intronic
chr2:203668330(-) A-I      intronic
chr2:203703979(-) A-I      intronic
chr2:203725326(-) A-I      intronic
chr2:203725436(-) A-I      intronic
chr2:203699304(-) A-I      intronic
chr2:203730156(-) A-I      intronic
chr2:203699095(-) A-I      intronic
chr2:203692016(-) A-I      intronic
chr2:203691377(-) A-I      intronic
chr2:203646913(-) A-I      intronic
chr2:203689988(-) A-I      intronic
chr2:203691954(-) A-I      intronic
chr2:203690093(-) A-I      intronic
chr2:203699307(-) A-I      intronic
chr2:203730170(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ICA1L
chr2:203732059(-) A-G intron -    22484847
chr2:203646827(-) T-C intron -    22484847
chr2:203646903(-) A-G intron -    22484847
chr2:203646982(-) A-G intron -    22484847
chr2:203649047(-) T-C intron -    22484847
chr2:203649717(-) G-C intron -    22484847
chr2:203649759(-) T-C intron -    22484847
chr2:203649778(-) A-G intron -    22484847
chr2:203649819(-) T-C intron -    22484847
chr2:203649824(-) T-C intron -    22484847
chr2:203650282(-) T-C intron -    22484847
chr2:203650284(-) T-C intron -    22484847
chr2:203663091(-) T-C intron -    22484847
chr2:203668004(-) T-C intron -    22484847
chr2:203670231(-) T-C intron -    22484847
chr2:203687086(-) A-G intron -    22484847
chr2:203699223(-) A-G intron -    22484847
chr2:203699256(-) A-G intron -    22484847
chr2:203699630(-) A-G intron -    22484847
chr2:203710349(-) A-T intron -    22484847
chr2:203720798(-) C-T intron -    22484847
chr2:203729142(-) A-G intron -    22484847
chr2:203729220(-) A-G intron -    22484847
chr2:203729507(-) A-G intron -    22484847
chr2:203729579(-) A-G intron -    22484847
chr2:203730029(-) A-G intron -    22484847
chr2:203730035(-) A-G intron -    22484847
chr2:203730080(-) A-G intron -    22484847
chr2:203730092(-) A-G intron -    22484847
chr2:203730156(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ICA1L
chr2:203640694-203640695(-) m6A 3'UTR       27773535
chr2:203640801-203640802(-) m6A 3'UTR       27773535
chr2:203643104-203643105(-) m6A 3'UTR       27773535
chr2:203644105-203644106(-) m6A 3'UTR       27773535//22608085
chr2:203644118-203644119(-) m6A 3'UTR       27773535//22608085
chr2:203644221-203644222(-) m6A 3'UTR       24284625//24981863//27773535//27371828//22608085
chr2:203644270-203644271(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr2:203644285-203644286(-) m6A 3'UTR//CDS       25456834//24981863//27773535//22608085
chr2:203644301-203644302(-) m6A 3'UTR//CDS       25456834//24981863//27773535//22608085
chr2:203644319-203644320(-) m6A 3'UTR//CDS       25456834//24981863//27773535//22608085
chr2:203644349-203644350(-) m6A 3'UTR//CDS       24981863//27773535//27371828//22608085
chr2:203650704-203650705(-) m6A 3'UTR//CDS       27773535
chr2:203693651-203693652(-) m6A CDS//exon       24981863
chr2:203693656-203693657(-) m6A CDS//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ICA1L
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Membrane K562 cells     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL22A-5p
Interactor2: ICA1L

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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