Basic Information:

  VIRBase ID:  

VHID00218005

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          SESTD1:  NM_178123     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	SESTD1
miRBase Accession/Entrez ID	MIMAT0001574	91404
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SOLO

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SESTD1	chr2:180025808(-) A-I      intronic chr2:180025811(-) A-I      intronic chr2:180024154(-) A-I      intronic chr2:180112440(-) A-I      intronic chr2:180112290(-) A-I      intronic chr2:180098329(-) A-I      intronic chr2:180098313(-) A-I      intronic chr2:180095105(-) A-I      intronic chr2:180094995(-) A-I      intronic chr2:180094953(-) A-I      intronic chr2:180027716(-) A-I      intronic chr2:180027601(-) A-I      intronic chr2:180024856(-) A-I      intronic chr2:180024851(-) A-I      intronic chr2:180024693(-) A-I      intronic chr2:180020281(-) A-I      intronic chr2:180020260(-) A-I      intronic chr2:180000397(-) A-I      intronic chr2:180000380(-) A-I      intronic chr2:179999851(-) A-I      intronic chr2:179999849(-) A-I      intronic chr2:179999809(-) A-I      intronic chr2:179999783(-) A-I      intronic chr2:179999768(-) A-I      intronic chr2:179999702(-) A-I      intronic chr2:179984893(-) A-I      intronic chr2:180125229(-) A-I      intronic chr2:180125143(-) A-I      intronic chr2:180124151(-) A-I      intronic chr2:180124150(-) A-I      intronic chr2:180124096(-) A-I      intronic chr2:180124055(-) A-I      intronic chr2:180118614(-) A-I      intronic chr2:180125148(-) A-I      intronic chr2:180032586(-) A-I      intronic chr2:180095042(-) A-I      intronic chr2:180124139(-) A-I      intronic chr2:180094987(-) A-I      intronic chr2:180027635(-) A-I      intronic chr2:180027532(-) A-I      intronic chr2:179976652(-) A-I      intronic chr2:180020248(-) A-I      intronic chr2:180109847(-) A-I      intronic chr2:179999854(-) A-I      intronic chr2:180109932(-) A-I      intronic chr2:180124130(-) A-I      intronic chr2:180000246(-) A-I      intronic chr2:180025922(-) A-I      intronic chr2:179999860(-) A-I      intronic chr2:180112442(-) A-I      intronic chr2:179976611(-) A-I      intronic chr2:180000385(-) A-I      intronic chr2:180019838(-) A-I      intronic chr2:180027464(-) A-I      intronic chr2:180000466(-) A-I      intronic chr2:180095027(-) A-I      intronic chr2:180124069(-) A-I      intronic chr2:180098318(-) A-I      intronic chr2:180094965(-) A-I      intronic chr2:180025764(-) A-I      intronic chr2:180025799(-) A-I      intronic chr2:180112386(-) A-I      intronic chr2:180000474(-) A-I      intronic chr2:180019737(-) A-I      intronic chr2:180095136(-) A-I      intronic chr2:180000396(-) A-I      intronic chr2:180025915(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SESTD1	chr2:179999854(-) A-G intron -    22484847 chr2:179999860(-) A-G intron -    22484847 chr2:180000385(-) A-G intron -    22484847 chr2:180000386(-) A-G intron -    22484847 chr2:180000396(-) A-G intron -    22484847 chr2:180027606(-) A-G intron -    22484847 chr2:180124139(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SESTD1	chr2:179966476-179966477(-) m6A 3'UTR       27773535 chr2:179966487-179966488(-) m6A 3'UTR       27773535 chr2:179966560-179966561(-) m6A 3'UTR       27773535 chr2:179967559-179967560(-) m6A 3'UTR       27773535 chr2:179969511-179969512(-) m6A 3'UTR       27773535 chr2:179969568-179969569(-) m6A 3'UTR       27773535 chr2:179969577-179969578(-) m6A 3'UTR       27773535 chr2:179969593-179969594(-) m6A 3'UTR       27773535 chr2:179969602-179969603(-) m6A 3'UTR       27773535 chr2:179969614-179969615(-) m6A 3'UTR       27773535 chr2:179969646-179969647(-) m6A 3'UTR       27773535 chr2:179969666-179969667(-) m6A 3'UTR       27773535 chr2:179969731-179969732(-) m6A 3'UTR       27773535 chr2:179969771-179969772(-) m6A 3'UTR       27773535 chr2:179969778-179969779(-) m6A 3'UTR       27773535 chr2:179969817-179969818(-) m6A 3'UTR       24981863//27773535 chr2:179969836-179969837(-) m6A 3'UTR       24981863//27773535 chr2:179969884-179969885(-) m6A 3'UTR       24981863//27773535 chr2:179969899-179969900(-) m6A 3'UTR       24981863//27773535 chr2:179969904-179969905(-) m6A 3'UTR       24981863//27773535 chr2:179969966-179969967(-) m6A 3'UTR       24981863//27773535 chr2:179970028-179970029(-) m6A 3'UTR       27773535 chr2:179970088-179970089(-) m6A 3'UTR       27773535 chr2:179970103-179970104(-) m6A 3'UTR       27773535 chr2:179973139-179973140(-) m6A 3'UTR       27773535 chr2:179973180-179973181(-) m6A 3'UTR       27773535 chr2:179973325-179973326(-) m6A 3'UTR       27773535 chr2:179973358-179973359(-) m6A 3'UTR       27773535 chr2:179974655-179974656(-) m6A 3'UTR//CDS       27371828 chr2:179974685-179974686(-) m6A 3'UTR//CDS       27371828 chr2:179974695-179974696(-) m6A 3'UTR//CDS       27371828 chr2:179974704-179974705(-) m6A 3'UTR//CDS       27371828 chr2:179974748-179974749(-) m6A 3'UTR//CDS       27371828 chr2:179997091-179997092(-) m6A CDS//exon//intron       24981863 chr2:179997120-179997121(-) m6A CDS//exon//intron       24981863 chr2:179997145-179997146(-) m6A CDS//exon//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SESTD1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: SESTD1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg