Basic Information:

  VIRBase ID:  

VHID00217994

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          ATG16L2:  NM_001318766     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	ATG16L2
miRBase Accession/Entrez ID	MIMAT0001574	89849
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATG16B//WDR80

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATG16L2	chr11:72530989(+) A-I      intronic chr11:72527232(+) A-I      ncRNA chr11:72527104(+) A-I      ncRNA chr11:72538823(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATG16L2	chr11:72529956-72529957(+) m6A 3'UTR//intron       - chr11:72529968-72529969(+) m6A 3'UTR//intron       - chr11:72530030-72530031(+) m6A 3'UTR//intron       - chr11:72532306-72532307(+) m6A 3'UTR//intron       24284625 chr11:72532499-72532500(+) m6A 3'UTR//intron       24284625//27773536 chr11:72532545-72532546(+) m6A 3'UTR//intron       27773536 chr11:72532575-72532576(+) m6A 3'UTR//intron       27773536 chr11:72532659-72532660(+) m6A 3'UTR//intron       - chr11:72532962-72532963(+) m6A exon//intron       - chr11:72533059-72533060(+) m6A exon//intron       24209618 chr11:72533454-72533455(+) m6A CDS//intron       - chr11:72533571-72533572(+) m6A 3'UTR//CDS//exon//intron       - chr11:72533720-72533721(+) m6A 3'UTR//exon//intron       - chr11:72533733-72533734(+) m6A 3'UTR//exon//intron       - chr11:72533873-72533874(+) m6A 3'UTR//exon//intron       - chr11:72533900-72533901(+) m6A 3'UTR//CDS//exon//intron       - chr11:72533935-72533936(+) m6A 3'UTR//CDS//exon//intron       - chr11:72534012-72534013(+) m6A 3'UTR//exon//intron       - chr11:72538240-72538241(+) m6A 3'UTR//CDS//exon//intron       - chr11:72538283-72538284(+) m6A 3'UTR//CDS//exon//intron       - chr11:72538331-72538332(+) m6A 3'UTR//CDS//exon//intron       - chr11:72540403-72540404(+) m6A 3'UTR//CDS//exon//intron       - chr11:72540517-72540518(+) m6A 3'UTR//exon//intron       - chr11:72540562-72540563(+) m6A 3'UTR//exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ATG16L2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: ATG16L2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg