Detail Information

Basic Information:


  VIRBase ID:  

VHID00217759

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:           IL17RD:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL22A-5p IL17RD
miRBase
Accession/Entrez ID		 MIMAT0001574 54756
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - HH18//IL-17RD//IL17RLM//SEF

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR IL17RD
chr3:57181102(-) A-I      intronic
chr3:57190574(-) A-I      intronic
chr3:57181015(-) A-I      intronic
chr3:57142668(-) A-I      intronic
chr3:57181140(-) A-I      intronic
chr3:57148173(-) A-I      intronic
chr3:57142682(-) A-I      intronic
chr3:57180913(-) A-I      intronic
chr3:57148174(-) A-I      intronic
chr3:57148130(-) A-I      intronic
chr3:57181092(-) A-I      intronic
chr3:57181078(-) A-I      intronic
chr3:57180867(-) A-I      intronic
chr3:57148129(-) A-I      intronic
chr3:57142605(-) A-I      intronic
chr3:57124659(-) A-I      3'UTR
chr3:57124640(-) A-I      3'UTR
chr3:57126458(-) A-I      3'UTR
chr3:57124555(-) A-I      3'UTR
chr3:57124545(-) A-I      3'UTR
chr3:57126423(-) A-I      3'UTR
chr3:57124510(-) A-I      3'UTR
chr3:57126403(-) A-I      3'UTR
chr3:57126374(-) A-I      3'UTR
chr3:57126358(-) A-I      3'UTR
chr3:57124700(-) A-I      3'UTR
chr3:57124683(-) A-I      3'UTR
chr3:57124542(-) A-I      3'UTR
chr3:57124539(-) A-I      3'UTR
chr3:57124517(-) A-I      3'UTR
chr3:57124597(-) A-I      3'UTR
chr3:57124471(-) A-I      3'UTR
chr3:57124496(-) A-I      3'UTR
chr3:57124506(-) A-I      3'UTR
chr3:57126449(-) A-I      3'UTR
chr3:57124603(-) A-I      3'UTR
chr3:57124608(-) A-I      3'UTR
chr3:57124612(-) A-I      3'UTR
chr3:57126517(-) A-I      3'UTR
chr3:57126505(-) A-I      3'UTR
chr3:57126493(-) A-I      3'UTR
chr3:57142140(-) A-I      intronic
chr3:57142825(-) A-I      intronic
chr3:57142328(-) A-I      intronic
chr3:57124566(-) A-I      3'UTR
chr3:57124519(-) A-I      3'UTR
chr3:57124652(-) A-I      3'UTR
chr3:57126373(-) A-I      3'UTR
chr3:57124628(-) A-I      3'UTR
chr3:57124627(-) A-I      3'UTR
chr3:57124609(-) A-I      3'UTR
chr3:57126427(-) A-I      3'UTR
chr3:57124598(-) A-I      3'UTR
chr3:57124571(-) A-I      3'UTR
chr3:57124606(-) A-I      3'UTR
chr3:57124636(-) A-I      3'UTR
chr3:57124557(-) A-I      3'UTR
chr3:57124562(-) A-I      3'UTR
chr3:57124684(-) A-I      3'UTR
chr3:57124724(-) A-I      3'UTR
chr3:57126360(-) A-I      3'UTR
chr3:57124637(-) A-I      3'UTR
chr3:57124705(-) A-I      3'UTR
chr3:57124626(-) A-I      3'UTR
chr3:57126372(-) A-I      3'UTR
chr3:57142816(-) A-I      intronic
chr3:57180922(-) A-I      intronic
chr3:57141150(-) A-I      intronic
chr3:57142953(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED IL17RD
chr3:57124519(-) A-I exon 3'UTR    15342557
chr3:57124562(-) A-I exon 3'UTR    15342557
chr3:57124566(-) A-I exon 3'UTR    15342557
chr3:57124571(-) A-I exon 3'UTR    15342557
chr3:57124572(-) A-I exon 3'UTR    15342557
chr3:57124606(-) A-I exon 3'UTR    15342557
chr3:57124609(-) A-I exon 3'UTR    15342557
chr3:57124610(-) A-I exon 3'UTR    15342557
chr3:57124626(-) A-I exon 3'UTR    15342557
chr3:57124628(-) A-I exon 3'UTR    15342557
chr3:57124636(-) A-I exon 3'UTR    15342557
chr3:57124637(-) A-I exon 3'UTR    15342557
chr3:57124652(-) A-I exon 3'UTR    15342557
chr3:57124705(-) A-I exon 3'UTR    15342557
chr3:57124724(-) A-I exon 3'UTR    15342557
chr3:57125917(-) A-I exon 3'UTR    15342557
chr3:57126372(-) A-I exon 3'UTR    15342557
chr3:57126452(-) A-I exon 3'UTR    15342557
chr3:57126495(-) A-I exon 3'UTR    15342557
chr3:57168374(-) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IL17RD
chr3:57127870-57127871(-) m6A 3'UTR       24981863
chr3:57128463-57128464(-) m6A 3'UTR       25456834//24981863
chr3:57128524-57128525(-) m6A 3'UTR       25456834//24981863//22608085
chr3:57128610-57128611(-) m6A 3'UTR       25456834//24981863//22608085
chr3:57129052-57129053(-) m6A 3'UTR       25456834
chr3:57129089-57129090(-) m6A 3'UTR       25456834
chr3:57129115-57129116(-) m6A 3'UTR       25456834
chr3:57130060-57130061(-) m6A 3'UTR       24981863//22608085
chr3:57130079-57130080(-) m6A 3'UTR       24981863//22608085
chr3:57130108-57130109(-) m6A 3'UTR       25456834//24981863//22608085
chr3:57130241-57130242(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr3:57130444-57130445(-) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr3:57130522-57130523(-) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr3:57131503-57131504(-) m6A exon//intron       24284625//25456834//22608085
chr3:57131514-57131515(-) m6A exon//intron       24284625//25456834//22608085
chr3:57131671-57131672(-) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085
chr3:57131676-57131677(-) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085
chr3:57131687-57131688(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773536//22608085
chr3:57131748-57131749(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr3:57131760-57131761(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr3:57131847-57131848(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr3:57131888-57131889(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773536//22608085
chr3:57131948-57131949(-) m6A CDS//exon       24284625//25456834//24981863//22608085
chr3:57132135-57132136(-) m6A CDS//exon       24284625//25456834//24981863//27371828//22608085
chr3:57132186-57132187(-) m6A CDS//exon       24284625//25456834//24981863//27371828//22608085
chr3:57132225-57132226(-) m6A CDS//exon       24284625//25456834//24981863//22608085
chr3:57132233-57132234(-) m6A CDS//exon       24284625//25456834//24981863//22608085
chr3:57132252-57132253(-) m6A CDS//exon       24284625//25456834//24981863//22608085
chr3:57132422-57132423(-) m6A CDS//exon       25456834
chr3:57132429-57132430(-) m6A CDS//exon       25456834
chr3:57132438-57132439(-) m6A CDS//exon       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IL17RD
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL22A-5p
Interactor2: IL17RD

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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