Detail Information

Basic Information:


  VIRBase ID:  

VHID00217741

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:           DCUN1D1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL22A-5p DCUN1D1
miRBase
Accession/Entrez ID		 MIMAT0001574 54165
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - DCNL1//DCUN1L1//RP42//SCCRO//SCRO//Tes3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DCUN1D1
chr3:182695584(-) A-I      intronic
chr3:182695648(-) A-I      intronic
chr3:182695693(-) A-I      intronic
chr3:182695728(-) A-I      intronic
chr3:182695765(-) A-I      intronic
chr3:182695781(-) A-I      intronic
chr3:182695790(-) A-I      intronic
chr3:182669700(-) A-I      intronic
chr3:182669708(-) A-I      intronic
chr3:182669711(-) A-I      intronic
chr3:182669721(-) A-I      intronic
chr3:182686477(-) A-I      intronic
chr3:182686499(-) A-I      intronic
chr3:182675242(-) A-I      intronic
chr3:182668003(-) A-I      intronic
chr3:182668044(-) A-I      intronic
chr3:182668060(-) A-I      intronic
chr3:182668064(-) A-I      intronic
chr3:182668113(-) A-I      intronic
chr3:182668118(-) A-I      intronic
chr3:182668793(-) A-I      intronic
chr3:182669763(-) A-I      intronic
chr3:182673854(-) A-I      intronic
chr3:182675152(-) A-I      intronic
chr3:182675197(-) A-I      intronic
chr3:182675298(-) A-I      intronic
chr3:182675608(-) A-I      intronic
chr3:182675669(-) A-I      intronic
chr3:182690639(-) A-I      intronic
chr3:182690648(-) A-I      intronic
chr3:182690681(-) A-I      intronic
chr3:182690773(-) A-I      intronic
chr3:182685939(-) A-I      intronic
chr3:182686669(-) A-I      intronic
chr3:182687995(-) A-I      intronic
chr3:182688026(-) A-I      intronic
chr3:182689093(-) A-I      intronic
chr3:182689136(-) A-I      intronic
chr3:182689180(-) A-I      intronic
chr3:182689189(-) A-I      intronic
chr3:182689223(-) A-I      intronic
chr3:182689266(-) A-I      intronic
chr3:182689359(-) A-I      intronic
chr3:182690348(-) A-I      intronic
chr3:182690702(-) A-I      intronic
chr3:182691378(-) A-I      intronic
chr3:182691495(-) A-I      intronic
chr3:182693097(-) A-I      intronic
chr3:182693103(-) A-I      intronic
chr3:182693116(-) A-I      intronic
chr3:182695384(-) A-I      intronic
chr3:182686445(-) A-I      intronic
chr3:182668563(-) A-I      intronic
chr3:182669557(-) A-I      intronic
chr3:182690446(-) A-I      intronic
chr3:182675212(-) A-I      intronic
chr3:182690668(-) A-I      intronic
chr3:182690674(-) A-I      intronic
chr3:182668047(-) A-I      intronic
chr3:182690708(-) A-I      intronic
chr3:182701341(-) A-I      intronic
chr3:182695720(-) A-I      intronic
chr3:182686526(-) A-I      intronic
chr3:182695326(-) A-I      intronic
chr3:182667425(-) A-I      intronic
chr3:182690572(-) A-I      intronic
chr3:182703172(-) A-I      intronic
chr3:182684773(-) A-I      intronic
chr3:182686661(-) A-I      intronic
chr3:182700597(-) A-I      intronic
chr3:182667353(-) A-I      intronic
chr3:182691412(-) A-I      intronic
chr3:182695706(-) A-I      intronic
chr3:182675235(-) A-I      intronic
chr3:182687859(-) A-I      intronic
chr3:182668073(-) A-I      intronic
chr3:182689245(-) A-I      intronic
chr3:182695665(-) A-I      intronic
chr3:182687786(-) A-I      intronic
chr3:182669590(-) A-I      intronic
chr3:182693236(-) A-I      intronic
chr3:182689274(-) A-I      intronic
chr3:182668135(-) A-I      intronic
chr3:182666603(-) A-I      intronic
chr3:182667952(-) A-I      intronic
chr3:182691543(-) A-I      intronic
chr3:182668548(-) A-I      intronic
chr3:182669282(-) A-I      intronic
chr3:182673537(-) A-I      intronic
chr3:182690743(-) A-I      intronic
chr3:182668711(-) A-I      intronic
chr3:182695729(-) A-I      intronic
chr3:182695782(-) A-I      intronic
chr3:182688000(-) A-I      intronic
chr3:182691891(-) A-I      intronic
chr3:182690421(-) A-I      intronic
chr3:182691918(-) A-I      intronic
chr3:182688019(-) A-I      intronic
chr3:182685970(-) A-I      intronic
chr3:182686525(-) A-I      intronic
chr3:182668610(-) A-I      intronic
chr3:182675643(-) A-I      intronic
chr3:182695352(-) A-I      intronic
chr3:182693037(-) A-I      intronic
chr3:182669757(-) A-I      intronic
chr3:182668206(-) A-I      intronic
chr3:182687990(-) A-I      intronic
chr3:182668032(-) A-I      intronic
chr3:182669649(-) A-I      intronic
chr3:182669304(-) A-I      intronic
chr3:182690721(-) A-I      intronic
chr3:182690748(-) A-I      intronic
chr3:182687824(-) A-I      intronic
chr3:182689161(-) A-I      intronic
chr3:182691868(-) A-I      intronic
chr3:182700498(-) A-I      intronic
chr3:182667399(-) A-I      intronic
chr3:182675302(-) A-I      intronic
chr3:182668536(-) A-I      intronic
chr3:182668682(-) A-I      intronic
chr3:182701238(-) A-I      intronic
chr3:182690524(-) A-I      intronic
chr3:182669756(-) A-I      intronic
chr3:182667996(-) A-I      intronic
chr3:182673506(-) A-I      intronic
chr3:182690682(-) A-I      intronic
chr3:182693237(-) A-I      intronic
chr3:182668630(-) A-I      intronic
chr3:182669292(-) A-I      intronic
chr3:182689135(-) A-I      intronic
chr3:182668627(-) A-I      intronic
chr3:182668168(-) A-I      intronic
chr3:182686455(-) A-I      intronic
chr3:182669303(-) A-I      intronic
chr3:182691905(-) A-I      intronic
chr3:182690730(-) A-I      intronic
chr3:182695577(-) A-I      intronic
chr3:182691892(-) A-I      intronic
chr3:182675331(-) A-I      intronic
chr3:182700651(-) A-I      intronic
chr3:182669663(-) A-I      intronic
chr3:182686660(-) A-I      intronic
chr3:182691857(-) A-I      intronic
chr3:182690747(-) A-I      intronic
chr3:182668074(-) A-I      intronic
chr3:182673469(-) A-I      intronic
chr3:182700527(-) A-I      intronic
chr3:182689252(-) A-I      intronic
chr3:182684690(-) A-I      intronic
chr3:182693228(-) A-I      intronic
chr3:182689278(-) A-I      intronic
chr3:182684651(-) A-I      intronic
chr3:182675692(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DCUN1D1
chr3:182690407(-) A-I intron -    15342557
chr3:182690417(-) A-I intron -    15342557
chr3:182690421(-) A-I intron -    15342557
chr3:182690479(-) A-I intron -    15342557
chr3:182690620(-) A-I intron -    15342557
chr3:182690668(-) A-I intron -    15342557
chr3:182690674(-) A-I intron -    15342557
chr3:182690682(-) A-I intron -    15342557
chr3:182690721(-) A-I intron -    15342557
chr3:182690730(-) A-I intron -    15342557
chr3:182690743(-) A-I intron -    15342557
chr3:182690744(-) A-I intron -    15342557
chr3:182690747(-) A-I intron -    15342557
chr3:182690748(-) A-I intron -    15342557
chr3:182690770(-) A-I intron -    15342557
chr3:182690791(-) A-I intron -    15342557
chr3:182691314(-) A-I intron -    15342557
chr3:182691412(-) A-I intron -    15342557
chr3:182691857(-) A-I intron -    15342557
chr3:182691892(-) A-I intron -    15342557
chr3:182691918(-) A-I intron -    15342557
chr3:182691994(-) A-I intron -    15342557
chr3:182692125(-) A-I intron -    15342557
chr3:182667996(-) A-G intron -    22484847
chr3:182668032(-) A-G intron -    22484847
chr3:182668047(-) A-G intron -    22484847
chr3:182668073(-) A-G intron -    22484847
chr3:182668074(-) A-G intron -    22484847
chr3:182668135(-) A-G intron -    22484847
chr3:182668563(-) A-G intron -    22484847
chr3:182668627(-) A-G intron -    22484847
chr3:182672951(-) A-G intron -    22484847
chr3:182675293(-) A-G intron -    22484847
chr3:182675331(-) A-G intron -    22484847
chr3:182685970(-) A-G intron -    22484847
chr3:182687859(-) A-G intron -    22484847
chr3:182689135(-) A-G intron -    22484847
chr3:182689161(-) A-G intron -    22484847
chr3:182690586(-) A-G intron -    22484847
chr3:182690770(-) A-G intron -    22484847
chr3:182691412(-) A-G intron -    22484847
chr3:182691994(-) A-G intron -    22484847
chr3:182693236(-) A-G intron -    22484847
chr3:182693237(-) A-G intron -    22484847
chr3:182695348(-) A-G intron -    22484847
chr3:182695352(-) A-G intron -    22484847
chr3:182695428(-) A-G intron -    22484847
chr3:182695489(-) A-G intron -    22484847
chr3:182695577(-) A-G intron -    22484847
chr3:182695720(-) A-G intron -    22484847
chr3:182695729(-) A-G intron -    22484847
chr3:182695745(-) A-G intron -    22484847
chr3:182695782(-) A-G intron -    22484847
chr3:182695828(-) G-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DCUN1D1
chr3:182657902-182657903(-) m6A 3'UTR       27773535
chr3:182657926-182657927(-) m6A 3'UTR       27773535
chr3:182658116-182658117(-) m6A 3'UTR       27773535
chr3:182658125-182658126(-) m6A 3'UTR       27773535
chr3:182658160-182658161(-) m6A 3'UTR       27773535
chr3:182658177-182658178(-) m6A 3'UTR       27773535
chr3:182658194-182658195(-) m6A 3'UTR       27773535
chr3:182658270-182658271(-) m6A 3'UTR       24981863
chr3:182662301-182662302(-) m6A 3'UTR       27773535//22608085
chr3:182662437-182662438(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr3:182662472-182662473(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr3:182662485-182662486(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr3:182662495-182662496(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr3:182662503-182662504(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr3:182662523-182662524(-) m6A 3'UTR       24981863//27773535//22608085
chr3:182662622-182662623(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr3:182662666-182662667(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:182662730-182662731(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:182662750-182662751(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:182662755-182662756(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:182662768-182662769(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:182662794-182662795(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr3:182662799-182662800(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr3:182662870-182662871(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:182662901-182662902(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr3:182665072-182665073(-) m6A 3'UTR//CDS       24284625//24209618//27773535//22608085
chr3:182665093-182665094(-) m6A 3'UTR//CDS       -
chr3:182679083-182679084(-) m6A 3'UTR//CDS       24981863//27773535
chr3:182679098-182679099(-) m6A 3'UTR//CDS       24981863//27773535//27371828
chr3:182679125-182679126(-) m6A 3'UTR//CDS       24981863//27773535//27371828
chr3:182681700-182681701(-) m6A 3'UTR//CDS       24981863//27773535
chr3:182683346-182683347(-) m6A CDS//intron       24981863//27773535
chr3:182683362-182683363(-) m6A CDS//intron       24981863//27773535
chr3:182683397-182683398(-) m6A CDS//intron       24981863//27773535//27371828//22608085
chr3:182683471-182683472(-) m6A CDS       24209618//24981863//27773535//27371828//22608085
chr3:182697882-182697883(-) m6A 5'UTR//intron       24209618//25456834//24981863//27773535//27371828//22608085
chr3:182698284-182698285(-) m6A 5'UTR//intron       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DCUN1D1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL22A-5p
Interactor2: DCUN1D1

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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