Basic Information:

  VIRBase ID:  

VHID00217731

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          ASB1:  NM_001330196     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	ASB1
miRBase Accession/Entrez ID	MIMAT0001574	51665
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ASB-1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ASB1	chr2:239338345(+) A-I      intronic chr2:239341956(+) A-I      ncRNA chr2:239338432(+) A-I      intronic chr2:239338420(+) A-I      intronic chr2:239337061(+) A-I      intronic chr2:239337096(+) A-I      intronic chr2:239338436(+) A-I      intronic chr2:239349905(+) A-I      intronic chr2:239341954(+) A-I      ncRNA

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ASB1	chr2:239337071(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ASB1	chr2:239341988-239341989(+) m6A exon//intron       24284625//24981863 chr2:239342257-239342258(+) m6A CDS//exon//intron       24209618 chr2:239342290-239342291(+) m6A CDS//exon//intron       24209618 chr2:239342298-239342299(+) m6A CDS//exon//intron       24209618 chr2:239344443-239344444(+) m6A CDS//exon//intron       24284625//25456834//24981863//22575960 chr2:239344492-239344493(+) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//22575960 chr2:239344566-239344567(+) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863 chr2:239344632-239344633(+) m6A 3'UTR//CDS//exon//intron       24284625 chr2:239353332-239353333(+) m6A 3'UTR//CDS//exon       24209618 chr2:239355035-239355036(+) m6A 3'UTR//CDS//exon       24209618 chr2:239355082-239355083(+) m6A 3'UTR//CDS//exon       24284625//24209618 chr2:239355120-239355121(+) m6A 3'UTR//CDS//exon       24284625//24209618 chr2:239355152-239355153(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr2:239355208-239355209(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr2:239355278-239355279(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr2:239355312-239355313(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr2:239355476-239355477(+) m6A 3'UTR//intron       24981863 chr2:239355494-239355495(+) m6A 3'UTR//intron       24981863 chr2:239355539-239355540(+) Y 3'UTR//intron       26075521 chr2:239355592-239355593(+) m6A 3'UTR//intron       24981863 chr2:239356838-239356839(+) m6A 3'UTR//intron       24284625//24981863 chr2:239356914-239356915(+) m6A 3'UTR//intron       24981863 chr2:239356920-239356921(+) m6A 3'UTR//intron       24981863 chr2:239357464-239357465(+) m6A 3'UTR//intron       - chr2:239357501-239357502(+) m6A 3'UTR//intron       - chr2:239357525-239357526(+) m6A 3'UTR//intron       - chr2:239357535-239357536(+) m6A 3'UTR//intron       - chr2:239358523-239358524(+) m6A 3'UTR//intron       - chr2:239358530-239358531(+) m6A 3'UTR//intron       - chr2:239358636-239358637(+) m6A 3'UTR//intron       - chr2:239359359-239359360(+) m6A 3'UTR//intron       24981863 chr2:239359398-239359399(+) m6A 3'UTR//intron       24981863 chr2:239359644-239359645(+) m6A 3'UTR//intron       24284625 chr2:239359650-239359651(+) m6A 3'UTR//intron       24284625 chr2:239359678-239359679(+) m6A 3'UTR//intron       24284625 chr2:239359684-239359685(+) m6A 3'UTR//intron       24284625 chr2:239360567-239360568(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr2:239360611-239360612(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr2:239360688-239360689(+) m6A 3'UTR//exon       - chr2:239360753-239360754(+) m6A 3'UTR//exon       - chr2:239360798-239360799(+) m6A 3'UTR//exon       - chr2:239360843-239360844(+) m6A 3'UTR//exon       - chr2:239360869-239360870(+) m6A 3'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ASB1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: ASB1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg