Basic Information:

  VIRBase ID:  

VHID00217697

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          ZNF330:  NM_001292002     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	ZNF330
miRBase Accession/Entrez ID	MIMAT0001574	27309
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HSA6591//NOA36

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF330	chr4:142143540-142143541(+) m6A CDS//exon       24981863//27773535 chr4:142143565-142143566(+) m6A CDS//exon       24981863//27773535 chr4:142143584-142143585(+) m6A CDS//exon       24981863//27773535 chr4:142143623-142143624(+) m6A CDS//exon       24981863//27773535 chr4:142143683-142143684(+) m6A exon//intron       - chr4:142153734-142153735(+) m6A 3'UTR//CDS       - chr4:142153765-142153766(+) m6A 3'UTR//CDS       - chr4:142153774-142153775(+) m6A 3'UTR//CDS       - chr4:142153781-142153782(+) m6A 3'UTR//CDS       - chr4:142154894-142154895(+) m6A 3'UTR//CDS       27773535 chr4:142154946-142154947(+) m6A 3'UTR//CDS       24981863//27773535 chr4:142155098-142155099(+) m6A 3'UTR//CDS       24209618//24981863//27773535//22608085 chr4:142155130-142155131(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr4:142155138-142155139(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr4:142155253-142155254(+) m6A 3'UTR       24284625//24209618//24981863//27773535 chr4:142155302-142155303(+) m6A 3'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF330	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: ZNF330

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg