Detail Information

Basic Information:


  VIRBase ID:  

VHID00217660

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:           DSTYK:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL22A-5p DSTYK
miRBase
Accession/Entrez ID		 MIMAT0001574 25778
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - CAKUT1//DustyPK//HDCMD38P//RIP5//RIPK5//SPG23

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DSTYK
chr1:205142952(-) A-I      intronic
chr1:205142949(-) A-I      intronic
chr1:205142975(-) A-I      intronic
chr1:205142985(-) A-I      intronic
chr1:205142958(-) A-I      intronic
chr1:205142967(-) A-I      intronic
chr1:205172962(-) A-I      intronic
chr1:205172961(-) A-I      intronic
chr1:205171008(-) A-I      intronic
chr1:205170240(-) A-I      intronic
chr1:205170227(-) A-I      intronic
chr1:205170226(-) A-I      intronic
chr1:205170221(-) A-I      intronic
chr1:205169591(-) A-I      intronic
chr1:205169551(-) A-I      intronic
chr1:205169313(-) A-I      intronic
chr1:205166043(-) A-I      intronic
chr1:205166025(-) A-I      intronic
chr1:205166024(-) A-I      intronic
chr1:205165563(-) A-I      intronic
chr1:205165519(-) A-I      intronic
chr1:205165511(-) A-I      intronic
chr1:205154614(-) A-I      intronic
chr1:205154325(-) A-I      intronic
chr1:205154220(-) A-I      intronic
chr1:205154217(-) A-I      intronic
chr1:205154091(-) A-I      intronic
chr1:205153780(-) A-I      intronic
chr1:205150974(-) A-I      intronic
chr1:205149665(-) A-I      intronic
chr1:205143012(-) A-I      intronic
chr1:205142971(-) A-I      intronic
chr1:205142436(-) A-I      intronic
chr1:205142435(-) A-I      intronic
chr1:205133504(-) A-I      intronic
chr1:205128292(-) A-I      intronic
chr1:205145860(-) A-I      intronic
chr1:205177745(-) A-I      intronic
chr1:205177143(-) A-I      intronic
chr1:205177006(-) A-I      intronic
chr1:205177071(-) A-I      intronic
chr1:205134264(-) A-I      intronic
chr1:205143759(-) A-I      intronic
chr1:205150659(-) A-I      intronic
chr1:205150661(-) A-I      intronic
chr1:205146168(-) A-I      intronic
chr1:205126720(-) A-I      intronic
chr1:205148003(-) A-I      intronic
chr1:205172502(-) A-I      intronic
chr1:205141357(-) A-I      intronic
chr1:205146104(-) A-I      intronic
chr1:205148188(-) A-I      intronic
chr1:205154567(-) A-I      intronic
chr1:205165635(-) A-I      intronic
chr1:205172515(-) A-I      intronic
chr1:205171065(-) A-I      intronic
chr1:205144416(-) A-I      intronic
chr1:205150942(-) A-I      intronic
chr1:205149820(-) A-I      intronic
chr1:205114651(-) A-I      3'UTR
chr1:205171105(-) A-I      intronic
chr1:205148181(-) A-I      intronic
chr1:205168045(-) A-I      intronic
chr1:205165983(-) A-I      intronic
chr1:205146142(-) A-I      intronic
chr1:205164099(-) A-I      intronic
chr1:205124283(-) A-I      intronic
chr1:205135064(-) A-I      intronic
chr1:205169452(-) A-I      intronic
chr1:205143289(-) A-I      intronic
chr1:205146332(-) A-I      intronic
chr1:205143123(-) A-I      intronic
chr1:205171016(-) A-I      intronic
chr1:205153617(-) A-I      intronic
chr1:205132636(-) A-I      intronic
chr1:205124259(-) A-I      intronic
chr1:205150934(-) A-I      intronic
chr1:205171075(-) A-I      intronic
chr1:205135546(-) A-I      intronic
chr1:205128285(-) A-I      intronic
chr1:205141685(-) A-I      intronic
chr1:205169303(-) A-I      intronic
chr1:205177767(-) A-I      intronic
chr1:205169521(-) A-I      intronic
chr1:205134961(-) A-I      intronic
chr1:205150665(-) A-I      intronic
chr1:205143962(-) A-I      intronic
chr1:205177835(-) A-I      intronic
chr1:205164029(-) A-I      intronic
chr1:205166002(-) A-I      intronic
chr1:205171111(-) A-I      intronic
chr1:205161968(-) A-I      intronic
chr1:205161943(-) A-I      intronic
chr1:205134289(-) A-I      intronic
chr1:205141136(-) A-I      intronic
chr1:205148006(-) A-I      intronic
chr1:205150679(-) A-I      intronic
chr1:205142439(-) A-I      intronic
chr1:205134324(-) A-I      intronic
chr1:205146213(-) A-I      intronic
chr1:205170976(-) A-I      intronic
chr1:205148555(-) A-I      intronic
chr1:205169574(-) A-I      intronic
chr1:205161951(-) A-I      intronic
chr1:205153588(-) A-I      intronic
chr1:205112269(-) A-I      3'UTR
chr1:205133487(-) A-I      intronic
chr1:205143067(-) A-I      intronic
chr1:205177847(-) A-I      intronic
chr1:205169302(-) A-I      intronic
chr1:205144138(-) A-I      intronic
chr1:205148559(-) A-I      intronic
chr1:205177070(-) A-I      intronic
chr1:205135529(-) A-I      intronic
chr1:205148189(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DSTYK
chr1:205148555(-) A-I intron -    15545495
chr1:205148559(-) A-I intron -    15545495
chr1:205177799(-) A-I intron -    21960545
chr1:205124232(-) G-C intron -    22484847
chr1:205124259(-) A-G intron -    22484847
chr1:205124274(-) T-C intron -    22484847
chr1:205124283(-) A-G intron -    22484847
chr1:205134264(-) A-G intron -    22484847
chr1:205143067(-) A-G intron -    22484847
chr1:205143123(-) A-G intron -    22484847
chr1:205143289(-) A-G intron -    22484847
chr1:205143759(-) A-G intron -    22484847
chr1:205143867(-) T-A intron -    22484847
chr1:205150659(-) A-G intron -    22484847
chr1:205150661(-) A-G intron -    22484847
chr1:205150665(-) A-G intron -    22484847
chr1:205150679(-) A-G intron -    22484847
chr1:205153617(-) A-G intron -    22484847
chr1:205171016(-) A-G intron -    22484847
chr1:205171065(-) A-G intron -    22484847
chr1:205171075(-) A-G intron -    22484847
chr1:205171105(-) A-G intron -    22484847
chr1:205171111(-) A-G intron -    22484847
chr1:205172914(-) A-C intron -    22484847
chr1:205177835(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DSTYK
chr1:205116080-205116081(-) m6A 3'UTR       27773535
chr1:205116127-205116128(-) m6A 3'UTR       27773535
chr1:205116215-205116216(-) m6A 3'UTR       27773535
chr1:205116221-205116222(-) m6A 3'UTR       27773535
chr1:205116229-205116230(-) m6A 3'UTR       27773535
chr1:205116266-205116267(-) m6A 3'UTR       27773535
chr1:205116341-205116342(-) m6A 3'UTR       27773535
chr1:205116353-205116354(-) m6A 3'UTR       27773535
chr1:205116526-205116527(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205116553-205116554(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205116560-205116561(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205116578-205116579(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205116594-205116595(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205116676-205116677(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr1:205116703-205116704(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr1:205116710-205116711(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr1:205132927-205132928(-) m6A CDS//intron       24284625
chr1:205138324-205138325(-) m6A CDS//intron       27773535//22608085
chr1:205138347-205138348(-) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085
chr1:205138466-205138467(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:205138526-205138527(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205138557-205138558(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205138591-205138592(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205138609-205138610(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205138658-205138659(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205138745-205138746(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205138765-205138766(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205138846-205138847(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:205156578-205156579(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085
chr1:205156609-205156610(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr1:205156643-205156644(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205156683-205156684(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205156692-205156693(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205156718-205156719(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205156724-205156725(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:205156873-205156874(-) m6A CDS       24284625//24209618//24981863
chr1:205180413-205180414(-) m6A CDS       24284625//24981863//27773536
chr1:205180521-205180522(-) m6A CDS       24981863//27371828//27773536
chr1:205180532-205180533(-) m6A CDS       24981863//27371828//27773536
chr1:205180680-205180681(-) m6A 5'UTR       25456834//24981863//27371828//27773536//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DSTYK
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL22A-5p
Interactor2: DSTYK

Evidence Support:


Prediction-Evidence miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...