Basic Information:

  VIRBase ID:  

VHID00217543

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          STAM2:  NM_005843     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	STAM2
miRBase Accession/Entrez ID	MIMAT0001574	10254
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Hbp//STAM2A//STAM2B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	STAM2	chr2:153005072(-) A-I      intronic chr2:153030039(-) A-I      intronic chr2:153022595(-) A-I      intronic chr2:152993520(-) A-I      intronic chr2:152978889(-) A-I      intronic chr2:152993553(-) A-I      intronic chr2:152993530(-) A-I      intronic chr2:152998001(-) A-I      intronic chr2:152978413(-) A-I      intronic chr2:153018469(-) A-I      intronic chr2:153018841(-) A-I      intronic chr2:153018842(-) A-I      intronic chr2:153019047(-) A-I      intronic chr2:153020928(-) A-I      intronic chr2:153020981(-) A-I      intronic chr2:153020995(-) A-I      intronic chr2:153022460(-) A-I      intronic chr2:153022464(-) A-I      intronic chr2:153021079(-) A-I      intronic chr2:153021721(-) A-I      intronic chr2:153022452(-) A-I      intronic chr2:152997920(-) A-I      intronic chr2:152998119(-) A-I      intronic chr2:152998216(-) A-I      intronic chr2:152998272(-) A-I      intronic chr2:152998273(-) A-I      intronic chr2:152977589(-) A-I      intronic chr2:153002567(-) A-I      intronic chr2:153004992(-) A-I      intronic chr2:153004975(-) A-I      intronic chr2:153030184(-) A-I      intronic chr2:153030183(-) A-I      intronic chr2:153014907(-) A-I      intronic chr2:153029350(-) A-I      intronic chr2:153029322(-) A-I      intronic chr2:153005018(-) A-I      intronic chr2:153005028(-) A-I      intronic chr2:153005029(-) A-I      intronic chr2:153005062(-) A-I      intronic chr2:153005102(-) A-I      intronic chr2:153005126(-) A-I      intronic chr2:153005155(-) A-I      intronic chr2:153001677(-) A-I      intronic chr2:153029303(-) A-I      intronic chr2:153029253(-) A-I      intronic chr2:153029250(-) A-I      intronic chr2:153029166(-) A-I      intronic chr2:153027424(-) A-I      intronic chr2:153027388(-) A-I      intronic chr2:153027386(-) A-I      intronic chr2:153027347(-) A-I      intronic chr2:152977603(-) A-I      intronic chr2:152977746(-) A-I      intronic chr2:152977755(-) A-I      intronic chr2:152977761(-) A-I      intronic chr2:152977769(-) A-I      intronic chr2:153027344(-) A-I      intronic chr2:152978675(-) A-I      intronic chr2:152978719(-) A-I      intronic chr2:152978722(-) A-I      intronic chr2:152978775(-) A-I      intronic chr2:152979329(-) A-I      intronic chr2:152979737(-) A-I      intronic chr2:152979864(-) A-I      intronic chr2:152984663(-) A-I      intronic chr2:152985741(-) A-I      intronic chr2:152985776(-) A-I      intronic chr2:152985914(-) A-I      intronic chr2:152985924(-) A-I      intronic chr2:152985937(-) A-I      intronic chr2:152986858(-) A-I      intronic chr2:152986898(-) A-I      intronic chr2:152986946(-) A-I      intronic chr2:152987032(-) A-I      intronic chr2:152987037(-) A-I      intronic chr2:152987045(-) A-I      intronic chr2:152987169(-) A-I      intronic chr2:152987319(-) A-I      intronic chr2:152987342(-) A-I      intronic chr2:152987354(-) A-I      intronic chr2:153026910(-) A-I      intronic chr2:153026544(-) A-I      intronic chr2:153006118(-) A-I      intronic chr2:153026534(-) A-I      intronic chr2:153026448(-) A-I      intronic chr2:153024945(-) A-I      intronic chr2:153024944(-) A-I      intronic chr2:153024803(-) A-I      intronic chr2:153024751(-) A-I      intronic chr2:153024747(-) A-I      intronic chr2:152987798(-) A-I      intronic chr2:152987827(-) A-I      intronic chr2:152987851(-) A-I      intronic chr2:152987884(-) A-I      intronic chr2:153024743(-) A-I      intronic chr2:153024338(-) A-I      intronic chr2:153024329(-) A-I      intronic chr2:153024302(-) A-I      intronic chr2:153024300(-) A-I      intronic chr2:153022569(-) A-I      intronic chr2:152987920(-) A-I      intronic chr2:152987923(-) A-I      intronic chr2:152997805(-) A-I      intronic chr2:152997820(-) A-I      intronic chr2:152997829(-) A-I      intronic chr2:152997847(-) A-I      intronic chr2:153008976(-) A-I      intronic chr2:153006165(-) A-I      intronic chr2:153006213(-) A-I      intronic chr2:153007096(-) A-I      intronic chr2:153007211(-) A-I      intronic chr2:153007220(-) A-I      intronic chr2:153007251(-) A-I      intronic chr2:153007279(-) A-I      intronic chr2:153007820(-) A-I      intronic chr2:153007844(-) A-I      intronic chr2:153008492(-) A-I      intronic chr2:153008516(-) A-I      intronic chr2:153008633(-) A-I      intronic chr2:153008634(-) A-I      intronic chr2:153008650(-) A-I      intronic chr2:153008659(-) A-I      intronic chr2:153008905(-) A-I      intronic chr2:153008951(-) A-I      intronic chr2:152997885(-) A-I      intronic chr2:153014826(-) A-I      intronic chr2:153014868(-) A-I      intronic chr2:152997900(-) A-I      intronic chr2:152997904(-) A-I      intronic chr2:153014878(-) A-I      intronic chr2:153014908(-) A-I      intronic chr2:153014952(-) A-I      intronic chr2:153018433(-) A-I      intronic chr2:153018460(-) A-I      intronic chr2:152987269(-) A-I      intronic chr2:153007203(-) A-I      intronic chr2:153026885(-) A-I      intronic chr2:153022612(-) A-I      intronic chr2:152978529(-) A-I      intronic chr2:153005177(-) A-I      intronic chr2:153026406(-) A-I      intronic chr2:152987127(-) A-I      intronic chr2:153018618(-) A-I      intronic chr2:153008896(-) A-I      intronic chr2:152998382(-) A-I      intronic chr2:153018835(-) A-I      intronic chr2:152985938(-) A-I      intronic chr2:153020883(-) A-I      intronic chr2:153006166(-) A-I      intronic chr2:153009061(-) A-I      intronic chr2:152998376(-) A-I      intronic chr2:152997639(-) A-I      intronic chr2:153002653(-) A-I      intronic chr2:152998269(-) A-I      intronic chr2:152987323(-) A-I      intronic chr2:152984665(-) A-I      intronic chr2:152997913(-) A-I      intronic chr2:152997965(-) A-I      intronic chr2:153024771(-) A-I      intronic chr2:152987256(-) A-I      intronic chr2:153027398(-) A-I      intronic chr2:152998278(-) A-I      intronic chr2:152998243(-) A-I      intronic chr2:153026875(-) A-I      intronic chr2:152997392(-) A-I      intronic chr2:153001791(-) A-I      intronic chr2:152984657(-) A-I      intronic chr2:152978887(-) A-I      intronic chr2:152996010(-) A-I      intronic chr2:153018587(-) A-I      intronic chr2:153002699(-) A-I      intronic chr2:152997521(-) A-I      intronic chr2:153019057(-) A-I      intronic chr2:153008882(-) A-I      intronic chr2:153026489(-) A-I      intronic chr2:152986799(-) A-I      intronic chr2:152998172(-) A-I      intronic chr2:153008719(-) A-I      intronic chr2:153026528(-) A-I      intronic chr2:153007198(-) A-I      intronic chr2:153019210(-) A-I      intronic chr2:153006140(-) A-I      intronic chr2:152998140(-) A-I      intronic chr2:153002539(-) A-I      intronic chr2:152992848(-) A-I      intronic chr2:153007060(-) A-I      intronic chr2:152978377(-) A-I      intronic chr2:153026525(-) A-I      intronic chr2:153024947(-) A-I      intronic chr2:152973948(-) A-I      3'UTR chr2:152997577(-) A-I      intronic chr2:153022543(-) A-I      intronic chr2:153007258(-) A-I      intronic chr2:153009032(-) A-I      intronic chr2:153006144(-) A-I      intronic chr2:152978548(-) A-I      intronic chr2:152998384(-) A-I      intronic chr2:153008658(-) A-I      intronic chr2:153026897(-) A-I      intronic chr2:153002540(-) A-I      intronic chr2:153007970(-) A-I      intronic chr2:153007204(-) A-I      intronic chr2:153008637(-) A-I      intronic chr2:152985799(-) A-I      intronic chr2:153007321(-) A-I      intronic chr2:153026623(-) A-I      intronic chr2:153021750(-) A-I      intronic chr2:152987115(-) A-I      intronic chr2:152987038(-) A-I      intronic chr2:152997966(-) A-I      intronic chr2:153008722(-) A-I      intronic chr2:152977570(-) A-I      intronic chr2:152985781(-) A-I      intronic chr2:152998287(-) A-I      intronic chr2:153024164(-) A-I      intronic chr2:153030085(-) A-I      intronic chr2:152984797(-) A-I      intronic chr2:153026552(-) A-I      intronic chr2:152998299(-) A-I      intronic chr2:153008651(-) A-I      intronic chr2:153005011(-) A-I      intronic chr2:153029126(-) A-I      intronic chr2:153026913(-) A-I      intronic chr2:153025964(-) A-I      intronic chr2:153030075(-) A-I      intronic chr2:152978369(-) A-I      intronic chr2:153007320(-) A-I      intronic chr2:152998375(-) A-I      intronic chr2:153006150(-) A-I      intronic chr2:153030013(-) A-I      intronic chr2:152998170(-) A-I      intronic chr2:153018474(-) A-I      intronic chr2:153026467(-) A-I      intronic chr2:153008963(-) A-I      intronic chr2:152987706(-) A-I      intronic chr2:152977515(-) A-I      intronic chr2:152997867(-) A-I      intronic chr2:153020924(-) A-I      intronic chr2:153008630(-) A-I      intronic chr2:152987137(-) A-I      intronic chr2:152993600(-) A-I      intronic chr2:152998275(-) A-I      intronic chr2:152985864(-) A-I      intronic chr2:152985868(-) A-I      intronic chr2:152977575(-) A-I      intronic chr2:153022549(-) A-I      intronic chr2:153006127(-) A-I      intronic chr2:152987200(-) A-I      intronic chr2:153026405(-) A-I      intronic chr2:152979571(-) A-I      intronic chr2:152977684(-) A-I      intronic chr2:153008632(-) A-I      intronic chr2:153029302(-) A-I      intronic chr2:153022496(-) A-I      intronic chr2:153006229(-) A-I      intronic chr2:152997924(-) A-I      intronic chr2:153024852(-) A-I      intronic chr2:153022545(-) A-I      intronic chr2:153026460(-) A-I      intronic chr2:153030178(-) A-I      intronic chr2:152977683(-) A-I      intronic chr2:153030049(-) A-I      intronic chr2:152993681(-) A-I      intronic chr2:153020994(-) A-I      intronic chr2:153029321(-) A-I      intronic chr2:153008628(-) A-I      intronic chr2:153018972(-) A-I      intronic chr2:153024862(-) A-I      intronic chr2:152984799(-) A-I      intronic chr2:153005068(-) A-I      intronic chr2:153006119(-) A-I      intronic chr2:152978870(-) A-I      intronic chr2:153026461(-) A-I      intronic chr2:153026578(-) A-I      intronic chr2:153007928(-) A-I      intronic chr2:153004981(-) A-I      intronic chr2:152985784(-) A-I      intronic chr2:153018978(-) A-I      intronic chr2:152997541(-) A-I      intronic chr2:153024372(-) A-I      intronic chr2:153026624(-) A-I      intronic chr2:153007212(-) A-I      intronic chr2:152987441(-) A-I      intronic chr2:153008808(-) A-I      intronic chr2:153008514(-) A-I      intronic chr2:153022654(-) A-I      intronic chr2:152996018(-) A-I      intronic chr2:152987784(-) A-I      intronic chr2:152998055(-) A-I      intronic chr2:152997383(-) A-I      intronic chr2:153022662(-) A-I      intronic chr2:152978308(-) A-I      intronic chr2:152992694(-) A-I      intronic chr2:152997936(-) A-I      intronic chr2:153008575(-) A-I      intronic chr2:152985944(-) A-I      intronic chr2:152993547(-) A-I      intronic chr2:153019223(-) A-I      intronic chr2:153002702(-) A-I      intronic chr2:152993592(-) A-I      intronic chr2:153008631(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	STAM2	chr2:152976718(-) A-I exon 3'UTR    21960545 chr2:152976779(-) A-I exon 3'UTR    21960545 chr2:152977683(-) A-G intron -    22484847 chr2:152977754(-) A-G intron -    22484847 chr2:152978369(-) A-G intron -    22484847 chr2:152978377(-) A-G intron -    22484847 chr2:152978394(-) A-G intron -    22484847 chr2:152978887(-) A-G intron -    22484847 chr2:152984799(-) A-G intron -    22484847 chr2:152985799(-) A-G intron -    22484847 chr2:152985825(-) A-G intron -    22484847 chr2:152985864(-) A-G intron -    22484847 chr2:152985868(-) A-G intron -    22484847 chr2:152985940(-) A-G intron -    22484847 chr2:152985944(-) A-G intron -    22484847 chr2:152986838(-) A-G intron -    22484847 chr2:152986904(-) A-G intron -    22484847 chr2:152987038(-) A-G intron -    22484847 chr2:152987278(-) A-G intron -    22484847 chr2:152987395(-) A-G intron -    22484847 chr2:152987441(-) A-G intron -    22484847 chr2:152997521(-) A-G intron -    22484847 chr2:152997577(-) A-G intron -    22484847 chr2:152997639(-) A-G intron -    22484847 chr2:152997867(-) A-G intron -    22484847 chr2:152997913(-) A-G intron -    22484847 chr2:152997924(-) A-G intron -    22484847 chr2:152997936(-) A-G intron -    22484847 chr2:152997965(-) A-G intron -    22484847 chr2:152997966(-) A-G intron -    22484847 chr2:152997996(-) A-G intron -    22484847 chr2:152998140(-) A-G intron -    22484847 chr2:152998170(-) A-G intron -    22484847 chr2:152998172(-) A-G intron -    22484847 chr2:152998237(-) A-G intron -    22484847 chr2:152998243(-) A-G intron -    22484847 chr2:152998269(-) A-G intron -    22484847 chr2:152998275(-) A-G intron -    22484847 chr2:152998278(-) A-G intron -    22484847 chr2:152998375(-) A-G intron -    22484847 chr2:152998376(-) A-G intron -    22484847 chr2:152998382(-) A-G intron -    22484847 chr2:153002539(-) A-G intron -    22484847 chr2:153002540(-) A-G intron -    22484847 chr2:153002653(-) A-G intron -    22484847 chr2:153002702(-) A-G intron -    22484847 chr2:153004981(-) A-G intron -    22484847 chr2:153005011(-) A-G intron -    22484847 chr2:153005068(-) A-G intron -    22484847 chr2:153006119(-) A-G intron -    22484847 chr2:153006127(-) A-G intron -    22484847 chr2:153006229(-) A-G intron -    22484847 chr2:153007130(-) A-G intron -    22484847 chr2:153007198(-) A-G intron -    22484847 chr2:153007203(-) A-G intron -    22484847 chr2:153007204(-) A-G intron -    22484847 chr2:153007212(-) A-G intron -    22484847 chr2:153007237(-) A-G intron -    22484847 chr2:153007258(-) A-G intron -    22484847 chr2:153007318(-) A-G intron -    22484847 chr2:153007320(-) A-G intron -    22484847 chr2:153007834(-) A-G intron -    22484847 chr2:153008514(-) A-G intron -    22484847 chr2:153008575(-) A-G intron -    22484847 chr2:153008628(-) A-G intron -    22484847 chr2:153008630(-) A-G intron -    22484847 chr2:153008631(-) A-G intron -    22484847 chr2:153008632(-) A-G intron -    22484847 chr2:153008637(-) A-G intron -    22484847 chr2:153008648(-) A-G intron -    22484847 chr2:153008651(-) A-G intron -    22484847 chr2:153008658(-) A-G intron -    22484847 chr2:153008719(-) A-G intron -    22484847 chr2:153008722(-) A-G intron -    22484847 chr2:153008874(-) A-G intron -    22484847 chr2:153008882(-) A-G intron -    22484847 chr2:153008896(-) A-G intron -    22484847 chr2:153008899(-) A-G intron -    22484847 chr2:153008963(-) A-G intron -    22484847 chr2:153009032(-) A-G intron -    22484847 chr2:153018474(-) A-G intron -    22484847 chr2:153018618(-) A-G intron -    22484847 chr2:153018835(-) A-G intron -    22484847 chr2:153018868(-) A-G intron -    22484847 chr2:153018972(-) A-G intron -    22484847 chr2:153018978(-) A-G intron -    22484847 chr2:153019041(-) A-G intron -    22484847 chr2:153019057(-) A-G intron -    22484847 chr2:153021750(-) A-G intron -    22484847 chr2:153022545(-) A-G intron -    22484847 chr2:153022551(-) A-G intron -    22484847 chr2:153022631(-) A-G intron -    22484847 chr2:153022662(-) A-G intron -    22484847 chr2:153024164(-) A-G intron -    22484847 chr2:153024312(-) A-G intron -    22484847 chr2:153024372(-) A-G intron -    22484847 chr2:153024771(-) A-G intron -    22484847 chr2:153024813(-) A-G intron -    22484847 chr2:153024852(-) A-G intron -    22484847 chr2:153024856(-) A-G intron -    22484847 chr2:153024862(-) A-G intron -    22484847 chr2:153024947(-) A-G intron -    22484847 chr2:153025955(-) A-G intron -    22484847 chr2:153025964(-) A-G intron -    22484847 chr2:153026525(-) A-G intron -    22484847 chr2:153026623(-) A-G intron -    22484847 chr2:153026624(-) A-G intron -    22484847 chr2:153026885(-) A-G intron -    22484847 chr2:153026897(-) A-G intron -    22484847 chr2:153026913(-) A-G intron -    22484847 chr2:153026975(-) A-G intron -    22484847 chr2:153029298(-) A-G intron -    22484847 chr2:153029302(-) A-G intron -    22484847 chr2:153030049(-) A-G intron -    22484847 chr2:153030075(-) A-G intron -    22484847 chr2:153030085(-) A-G intron -    22484847 chr2:153030178(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	STAM2	chr2:152975266-152975267(-) m6A 3'UTR       27773535 chr2:152976958-152976959(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:152976982-152976983(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr2:152977008-152977009(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr2:152977084-152977085(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr2:152977190-152977191(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085 chr2:152977271-152977272(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr2:152977277-152977278(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr2:152977304-152977305(-) m6A CDS//exon       24981863//27773535//22608085 chr2:152977309-152977310(-) m6A CDS//exon       24981863//27773535//22608085 chr2:152980292-152980293(-) m6A CDS//exon       24981863//22608085 chr2:152980365-152980366(-) m6A CDS//exon       22608085 chr2:152982841-152982842(-) m6A CDS//exon       27773535 chr2:152989988-152989989(-) m6A CDS//exon       26404942//27773535 chr2:152992031-152992032(-) m6A CDS//exon       26404942//27773535 chr2:152992039-152992040(-) m6A CDS//exon       26404942//27773535 chr2:152992074-152992075(-) m6A CDS//exon       27773535 chr2:153000372-153000373(-) m6A CDS//exon       24981863 chr2:153000384-153000385(-) m6A CDS//exon       24981863 chr2:153000391-153000392(-) m6A CDS//exon       24981863 chr2:153000482-153000483(-) m6A CDS//exon       24981863 chr2:153000498-153000499(-) m6A CDS//exon       24981863 chr2:153000504-153000505(-) m6A CDS//exon       24981863 chr2:153001268-153001269(-) m6A exon//intron       24981863 chr2:153006691-153006692(-) m6A CDS//exon//intron       27371828 chr2:153032187-153032188(-) m6A 5'UTR//exon       24981863//27371828//27773536 chr2:153032323-153032324(-) m6A 5'UTR       25456834//24981863//27371828//27773536 chr2:153032348-153032349(-) m6A 5'UTR       25456834//24981863//27371828//27773536 chr2:153032420-153032421(-) m6A 5'UTR       25456834//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	STAM2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleoplasm K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: STAM2

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg