Basic Information:

  VIRBase ID:  

VHID00217481

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-5p:  MIMAT0001574          RASAL2:  NM_004841     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-5p	RASAL2
miRBase Accession/Entrez ID	MIMAT0001574	9462
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NGAP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RASAL2	chr1:178328075(+) A-I      intronic chr1:178328074(+) A-I      intronic chr1:178328073(+) A-I      intronic chr1:178328069(+) A-I      intronic chr1:178328068(+) A-I      intronic chr1:178138315(+) A-I      intronic chr1:178138321(+) A-I      intronic chr1:178138323(+) A-I      intronic chr1:178229284(+) A-I      intronic chr1:178328056(+) A-I      intronic chr1:178138325(+) A-I      intronic chr1:178229290(+) A-I      intronic chr1:178229300(+) A-I      intronic chr1:178229321(+) A-I      intronic chr1:178270667(+) A-I      intronic chr1:178229271(+) A-I      intronic chr1:178117815(+) A-I      intronic chr1:178117808(+) A-I      intronic chr1:178117800(+) A-I      intronic chr1:178105772(+) A-I      intronic chr1:178105771(+) A-I      intronic chr1:178082543(+) A-I      intronic chr1:178082526(+) A-I      intronic chr1:178328062(+) A-I      intronic chr1:178138294(+) A-I      intronic chr1:178326898(+) A-I      intronic chr1:178078899(+) A-I      intronic chr1:178328038(+) A-I      intronic chr1:178328046(+) A-I      intronic chr1:178089853(+) A-I      intronic chr1:178326854(+) A-I      intronic chr1:178326860(+) A-I      intronic chr1:178397322(+) A-I      intronic chr1:178326882(+) A-I      intronic chr1:178089868(+) A-I      intronic chr1:178373886(+) A-I      intronic chr1:178354385(+) A-I      intronic chr1:178319498(+) A-I      intronic chr1:178319495(+) A-I      intronic chr1:178397320(+) A-I      intronic chr1:178271973(+) A-I      intronic chr1:178270807(+) A-I      intronic chr1:178270668(+) A-I      intronic chr1:178326894(+) A-I      intronic chr1:178326871(+) A-I      intronic chr1:178100442(+) A-I      intronic chr1:178085952(+) A-I      intronic chr1:178397319(+) A-I      intronic chr1:178397306(+) A-I      intronic chr1:178397275(+) A-I      intronic chr1:178328287(+) A-I      intronic chr1:178082540(+) A-I      intronic chr1:178082539(+) A-I      intronic chr1:178328275(+) A-I      intronic chr1:178328268(+) A-I      intronic chr1:178328252(+) A-I      intronic chr1:178120481(+) A-I      intronic chr1:178081574(+) A-I      intronic chr1:178069570(+) A-I      intronic chr1:178100109(+) A-I      intronic chr1:178100554(+) A-I      intronic chr1:178228736(+) A-I      intronic chr1:178081413(+) A-I      intronic chr1:178271965(+) A-I      intronic chr1:178232942(+) A-I      intronic chr1:178229368(+) A-I      intronic chr1:178174240(+) A-I      intronic chr1:178373241(+) A-I      intronic chr1:178082569(+) A-I      intronic chr1:178105705(+) A-I      intronic chr1:178069003(+) A-I      intronic chr1:178226801(+) A-I      intronic chr1:178105788(+) A-I      intronic chr1:178303985(+) A-I      intronic chr1:178232966(+) A-I      intronic chr1:178105798(+) A-I      intronic chr1:178079957(+) A-I      intronic chr1:178117831(+) A-I      intronic chr1:178303891(+) A-I      intronic chr1:178270697(+) A-I      intronic chr1:178100110(+) A-I      intronic chr1:178117603(+) A-I      intronic chr1:178348373(+) A-I      intronic chr1:178323019(+) A-I      intronic chr1:178303886(+) A-I      intronic chr1:178303884(+) A-I      intronic chr1:178301925(+) A-I      intronic chr1:178270844(+) A-I      intronic chr1:178301451(+) A-I      intronic chr1:178373137(+) A-I      intronic chr1:178373540(+) A-I      intronic chr1:178079862(+) A-I      intronic chr1:178271976(+) A-I      intronic chr1:178291203(+) A-I      intronic chr1:178295087(+) A-I      intronic chr1:178117095(+) A-I      intronic chr1:178295126(+) A-I      intronic chr1:178301435(+) A-I      intronic chr1:178116995(+) A-I      intronic chr1:178116985(+) A-I      intronic chr1:178079944(+) A-I      intronic chr1:178116534(+) A-I      intronic chr1:178174281(+) A-I      intronic chr1:178116950(+) A-I      intronic chr1:178116949(+) A-I      intronic chr1:178116531(+) A-I      intronic chr1:178301450(+) A-I      intronic chr1:178105867(+) A-I      intronic chr1:178090664(+) A-I      intronic chr1:178116414(+) A-I      intronic chr1:178116536(+) A-I      intronic chr1:178116504(+) A-I      intronic chr1:178322997(+) A-I      intronic chr1:178116514(+) A-I      intronic chr1:178100143(+) A-I      intronic chr1:178301533(+) A-I      intronic chr1:178176202(+) A-I      intronic chr1:178082552(+) A-I      intronic chr1:178227266(+) A-I      intronic chr1:178300921(+) A-I      intronic chr1:178102084(+) A-I      intronic chr1:178315439(+) A-I      intronic chr1:178296642(+) A-I      intronic chr1:178228814(+) A-I      intronic chr1:178117765(+) A-I      intronic chr1:178149730(+) A-I      intronic chr1:178129619(+) A-I      intronic chr1:178300406(+) A-I      intronic chr1:178290788(+) A-I      intronic chr1:178290830(+) A-I      intronic chr1:178273404(+) A-I      intronic chr1:178300855(+) A-I      intronic chr1:178079056(+) A-I      intronic chr1:178090720(+) A-I      intronic chr1:178103576(+) A-I      intronic chr1:178079887(+) A-I      intronic chr1:178128835(+) A-I      intronic chr1:178082573(+) A-I      intronic chr1:178266587(+) A-I      intronic chr1:178405896(+) A-I      intronic chr1:178120446(+) A-I      intronic chr1:178132210(+) A-I      intronic chr1:178227242(+) A-I      intronic chr1:178124235(+) A-I      intronic chr1:178149772(+) A-I      intronic chr1:178296709(+) A-I      intronic chr1:178105736(+) A-I      intronic chr1:178225976(+) A-I      intronic chr1:178149681(+) A-I      intronic chr1:178373316(+) A-I      intronic chr1:178100471(+) A-I      intronic chr1:178121720(+) A-I      intronic chr1:178129591(+) A-I      intronic chr1:178418332(+) A-I      intronic chr1:178359546(+) A-I      intronic chr1:178291151(+) A-I      intronic chr1:178301525(+) A-I      intronic chr1:178149714(+) A-I      intronic chr1:178099935(+) A-I      intronic chr1:178081525(+) A-I      intronic chr1:178117049(+) A-I      intronic chr1:178116421(+) A-I      intronic chr1:178265990(+) A-I      intronic chr1:178227263(+) A-I      intronic chr1:178226918(+) A-I      intronic chr1:178373616(+) A-I      intronic chr1:178087188(+) A-I      intronic chr1:178300839(+) A-I      intronic chr1:178183104(+) A-I      intronic chr1:178128926(+) A-I      intronic chr1:178266016(+) A-I      intronic chr1:178301494(+) A-I      intronic chr1:178103568(+) A-I      intronic chr1:178373929(+) A-I      intronic chr1:178082753(+) A-I      intronic chr1:178150674(+) A-I      intronic chr1:178230803(+) A-I      intronic chr1:178273477(+) A-I      intronic chr1:178079863(+) A-I      intronic chr1:178100497(+) A-I      intronic chr1:178176206(+) A-I      intronic chr1:178319511(+) A-I      intronic chr1:178380843(+) A-I      intronic chr1:178082738(+) A-I      intronic chr1:178176095(+) A-I      intronic chr1:178116409(+) A-I      intronic chr1:178087192(+) A-I      intronic chr1:178301381(+) A-I      intronic chr1:178116366(+) A-I      intronic chr1:178230832(+) A-I      intronic chr1:178149597(+) A-I      intronic chr1:178082701(+) A-I      intronic chr1:178128849(+) A-I      intronic chr1:178100545(+) A-I      intronic chr1:178246423(+) A-I      intronic chr1:178188614(+) A-I      intronic chr1:178277774(+) A-I      intronic chr1:178149679(+) A-I      intronic chr1:178087179(+) A-I      intronic chr1:178100373(+) A-I      intronic chr1:178116971(+) A-I      intronic chr1:178080884(+) A-I      intronic chr1:178319513(+) A-I      intronic chr1:178290832(+) A-I      intronic chr1:178105842(+) A-I      intronic chr1:178105785(+) A-I      intronic chr1:178226789(+) A-I      intronic chr1:178100617(+) A-I      intronic chr1:178100435(+) A-I      intronic chr1:178300907(+) A-I      intronic chr1:178131856(+) A-I      intronic chr1:178149757(+) A-I      intronic chr1:178149695(+) A-I      intronic chr1:178082778(+) A-I      intronic chr1:178188625(+) A-I      intronic chr1:178087138(+) A-I      intronic chr1:178182399(+) A-I      intronic chr1:178117794(+) A-I      intronic chr1:178266004(+) A-I      intronic chr1:178117847(+) A-I      intronic chr1:178319558(+) A-I      intronic chr1:178103588(+) A-I      intronic chr1:178176054(+) A-I      intronic chr1:178397748(+) A-I      intronic chr1:178078458(+) A-I      intronic chr1:178373580(+) A-I      intronic chr1:178229232(+) A-I      intronic chr1:178078975(+) A-I      intronic chr1:178123335(+) A-I      intronic chr1:178273597(+) A-I      intronic chr1:178186384(+) A-I      intronic chr1:178300399(+) A-I      intronic chr1:178228961(+) A-I      intronic chr1:178183189(+) A-I      intronic chr1:178373564(+) A-I      intronic chr1:178301575(+) A-I      intronic chr1:178117632(+) A-I      intronic chr1:178100576(+) A-I      intronic chr1:178117151(+) A-I      intronic chr1:178120434(+) A-I      intronic chr1:178296610(+) A-I      intronic chr1:178078475(+) A-I      intronic chr1:178079823(+) A-I      intronic chr1:178132205(+) A-I      intronic chr1:178129605(+) A-I      intronic chr1:178273468(+) A-I      intronic chr1:178105734(+) A-I      intronic chr1:178100618(+) A-I      intronic chr1:178270836(+) A-I      intronic chr1:178082557(+) A-I      intronic chr1:178087220(+) A-I      intronic chr1:178183284(+) A-I      intronic chr1:178296701(+) A-I      intronic chr1:178229233(+) A-I      intronic chr1:178348379(+) A-I      intronic chr1:178183111(+) A-I      intronic chr1:178079006(+) A-I      intronic chr1:178271974(+) A-I      intronic chr1:178100172(+) A-I      intronic chr1:178370750(+) A-I      intronic chr1:178180203(+) A-I      intronic chr1:178099934(+) A-I      intronic chr1:178078472(+) A-I      intronic chr1:178300871(+) A-I      intronic chr1:178246406(+) A-I      intronic chr1:178149759(+) A-I      intronic chr1:178117859(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RASAL2	chr1:178380843(+) A-I intron -    22327324 chr1:178090720(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RASAL2	chr1:178063349-178063350(+) m6A 5'UTR       25456834 chr1:178063371-178063372(+) m6A 5'UTR       25456834 chr1:178269143-178269144(+) m6A CDS//exon       24981863 chr1:178269156-178269157(+) m6A CDS//exon       24981863 chr1:178410738-178410739(+) m6A CDS       24284625//24981863//22608085 chr1:178410753-178410754(+) m6A CDS       24284625//24981863//22608085 chr1:178410764-178410765(+) m6A CDS       24284625//24981863//22608085 chr1:178411864-178411865(+) m6A CDS       24284625//24981863//22575960//22608085 chr1:178411895-178411896(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:178411938-178411939(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:178411948-178411949(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:178411967-178411968(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:178412050-178412051(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr1:178412160-178412161(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr1:178412168-178412169(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr1:178412199-178412200(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr1:178426021-178426022(+) m6A CDS//exon       24981863//22608085 chr1:178426829-178426830(+) m6A CDS//exon       24981863//22608085 chr1:178426849-178426850(+) m6A CDS//exon       24981863//22608085 chr1:178426858-178426859(+) m6A CDS//exon       24981863//22608085 chr1:178426878-178426879(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr1:178426981-178426982(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr1:178426990-178426991(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr1:178427090-178427091(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178427103-178427104(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178427161-178427162(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178427197-178427198(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178427266-178427267(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:178427308-178427309(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:178427324-178427325(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:178427377-178427378(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr1:178427408-178427409(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:178427470-178427471(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:178427579-178427580(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178427663-178427664(+) m6A CDS       24981863 chr1:178427670-178427671(+) m6A CDS       24981863 chr1:178433428-178433429(+) m6A CDS       24981863 chr1:178433457-178433458(+) m6A CDS       24981863 chr1:178433476-178433477(+) m6A CDS       24981863 chr1:178433508-178433509(+) m6A CDS       24981863 chr1:178435059-178435060(+) m6A CDS       24981863 chr1:178435074-178435075(+) m6A CDS       24284625//24981863 chr1:178435190-178435191(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178435212-178435213(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178436489-178436490(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:178439854-178439855(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr1:178442247-178442248(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr1:178442360-178442361(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr1:178442396-178442397(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:178442430-178442431(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:178442494-178442495(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:178442514-178442515(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:178442589-178442590(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:178442737-178442738(+) m6A 3'UTR       24981863 chr1:178442754-178442755(+) m6A 3'UTR       24981863 chr1:178442783-178442784(+) m6A 3'UTR       24981863//22608085 chr1:178442824-178442825(+) m6A 3'UTR       24981863//22608085 chr1:178442870-178442871(+) m6A 3'UTR       24981863//22608085 chr1:178442902-178442903(+) m6A 3'UTR       24981863//22608085 chr1:178442929-178442930(+) m6A 3'UTR       24981863//22608085 chr1:178442958-178442959(+) m6A 3'UTR       24981863//26404942//22608085 chr1:178442973-178442974(+) m6A 3'UTR       24981863//26404942//22608085 chr1:178443010-178443011(+) m6A 3'UTR       24981863//22608085 chr1:178443016-178443017(+) m6A 3'UTR       24981863//22608085 chr1:178443036-178443037(+) m6A 3'UTR       24981863//22608085 chr1:178443041-178443042(+) m6A 3'UTR       24981863//22608085 chr1:178443064-178443065(+) m6A 3'UTR       24981863//22608085 chr1:178443122-178443123(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RASAL2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-5p
Interactor2: RASAL2

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg