Basic Information:

  VIRBase ID:  

VHID00214070

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H6-3p:  MIMAT0015652          TNFSF18:  NM_005092     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H6-3p	TNFSF18
miRBase Accession/Entrez ID	MIMAT0015652	8995
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AITRL//GITRL//hGITRL//TL6//TNLG2A

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TNFSF18	chr1:173010255-173010256(-) m6A 3'UTR       - chr1:173010275-173010276(-) m6A 3'UTR       - chr1:173010320-173010321(-) m6A 3'UTR       - chr1:173010340-173010341(-) m6A 3'UTR       - chr1:173010386-173010387(-) m6A 3'UTR       - chr1:173010391-173010392(-) m6A 3'UTR       - chr1:173010503-173010504(-) m6A 3'UTR       - chr1:173010594-173010595(-) m6A CDS       - chr1:173010603-173010604(-) m6A CDS       24981863 chr1:173010625-173010626(-) m6A CDS       24981863 chr1:173010654-173010655(-) m6A CDS       24981863 chr1:173010664-173010665(-) m6A CDS       24981863 chr1:173010675-173010676(-) m6A CDS       24981863 chr1:173010681-173010682(-) m6A CDS       24981863 chr1:173010723-173010724(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TNFSF18	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H6-3p
Interactor2: TNFSF18

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg