Detail Information

Basic Information:


  VIRBase ID:  

VHID00211173

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H6-5p:           CIAPIN1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H6-5p CIAPIN1
miRBase
Accession/Entrez ID		 MIMAT0015651 57019
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - Anamorsin//CIAE2//DRE2//PRO0915

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CIAPIN1
chr16:57471576(-) A-I      intronic
chr16:57476356(-) A-I      intronic
chr16:57476390(-) A-I      intronic
chr16:57477176(-) A-I      intronic
chr16:57477216(-) A-I      intronic
chr16:57479253(-) A-I      intronic
chr16:57479227(-) A-I      intronic
chr16:57476407(-) A-I      intronic
chr16:57471547(-) A-I      intronic
chr16:57477552(-) A-I      intronic
chr16:57477543(-) A-I      intronic
chr16:57477537(-) A-I      intronic
chr16:57477220(-) A-I      intronic
chr16:57470982(-) A-I      intronic
chr16:57471008(-) A-I      intronic
chr16:57471532(-) A-I      intronic
chr16:57471597(-) A-I      intronic
chr16:57476095(-) A-I      intronic
chr16:57476114(-) A-I      intronic
chr16:57476118(-) A-I      intronic
chr16:57476182(-) A-I      intronic
chr16:57476551(-) A-I      intronic
chr16:57476561(-) A-I      intronic
chr16:57477149(-) A-I      intronic
chr16:57477171(-) A-I      intronic
chr16:57477190(-) A-I      intronic
chr16:57477270(-) A-I      intronic
chr16:57477283(-) A-I      intronic
chr16:57477307(-) A-I      intronic
chr16:57477502(-) A-I      intronic
chr16:57477508(-) A-I      intronic
chr16:57477541(-) A-I      intronic
chr16:57477545(-) A-I      intronic
chr16:57479214(-) A-I      intronic
chr16:57479275(-) A-I      intronic
chr16:57479289(-) A-I      intronic
chr16:57479788(-) A-I      intronic
chr16:57479823(-) A-I      intronic
chr16:57479927(-) A-I      intronic
chr16:57479961(-) A-I      intronic
chr16:57463807(-) A-I      intronic
chr16:57470839(-) A-I      intronic
chr16:57477546(-) A-I      intronic
chr16:57470977(-) A-I      intronic
chr16:57476175(-) A-I      intronic
chr16:57477507(-) A-I      intronic
chr16:57479284(-) A-I      intronic
chr16:57471670(-) A-I      intronic
chr16:57479324(-) A-I      intronic
chr16:57477219(-) A-I      intronic
chr16:57479926(-) A-I      intronic
chr16:57476201(-) A-I      intronic
chr16:57476539(-) A-I      intronic
chr16:57479424(-) A-I      intronic
chr16:57470813(-) A-I      intronic
chr16:57476149(-) A-I      intronic
chr16:57476014(-) A-I      intronic
chr16:57469594(-) A-I      intronic
chr16:57479271(-) A-I      intronic
chr16:57470850(-) A-I      intronic
chr16:57477230(-) A-I      intronic
chr16:57479193(-) A-I      intronic
chr16:57479270(-) A-I      intronic
chr16:57471717(-) A-I      intronic
chr16:57479985(-) A-I      intronic
chr16:57471589(-) A-I      intronic
chr16:57476092(-) A-I      intronic
chr16:57479938(-) A-I      intronic
chr16:57476522(-) A-I      intronic
chr16:57479319(-) A-I      intronic
chr16:57476393(-) A-I      intronic
chr16:57479940(-) A-I      intronic
chr16:57479936(-) A-I      intronic
chr16:57464909(-) A-I      intronic
chr16:57477224(-) A-I      intronic
chr16:57476130(-) A-I      intronic
chr16:57470801(-) A-I      intronic
chr16:57479163(-) A-I      intronic
chr16:57471696(-) A-I      intronic
chr16:57479184(-) A-I      intronic
chr16:57477466(-) A-I      intronic
chr16:57476013(-) A-I      intronic
chr16:57477442(-) A-I      intronic
chr16:57479197(-) A-I      intronic
chr16:57476015(-) A-I      intronic
chr16:57476037(-) A-I      intronic
chr16:57479982(-) A-I      intronic
chr16:57479866(-) A-I      intronic
chr16:57476355(-) A-I      intronic
chr16:57477534(-) A-I      intronic
chr16:57470867(-) A-I      intronic
chr16:57477530(-) A-I      intronic
chr16:57471578(-) A-I      intronic
chr16:57464889(-) A-I      intronic
chr16:57471684(-) A-I      intronic
chr16:57477288(-) A-I      intronic
chr16:57476158(-) A-I      intronic
chr16:57476516(-) A-I      intronic
chr16:57479334(-) A-I      intronic
chr16:57477167(-) A-I      intronic
chr16:57476054(-) A-I      intronic
chr16:57479922(-) A-I      intronic
chr16:57463829(-) A-I      intronic
chr16:57470915(-) A-I      intronic
chr16:57479333(-) A-I      intronic
chr16:57477269(-) A-I      intronic
chr16:57476136(-) A-I      intronic
chr16:57477137(-) A-I      intronic
chr16:57470272(-) A-I      intronic
chr16:57476078(-) A-I      intronic
chr16:57470288(-) A-I      intronic
chr16:57471001(-) A-I      intronic
chr16:57477548(-) A-I      intronic
chr16:57470904(-) A-I      intronic
chr16:57476055(-) A-I      intronic
chr16:57477549(-) A-I      intronic
chr16:57477635(-) A-I      intronic
chr16:57477323(-) A-I      intronic
chr16:57476416(-) A-I      intronic
chr16:57476146(-) A-I      intronic
chr16:57479337(-) A-I      intronic
chr16:57466162(-) A-I      intronic
chr16:57477208(-) A-I      intronic
chr16:57479895(-) A-I      intronic
chr16:57476041(-) A-I      intronic
chr16:57469659(-) A-I      intronic
chr16:57470870(-) A-I      intronic
chr16:57470927(-) A-I      intronic
chr16:57476429(-) A-I      intronic
chr16:57477172(-) A-I      intronic
chr16:57470976(-) A-I      intronic
chr16:57479297(-) A-I      intronic
chr16:57476546(-) A-I      intronic
chr16:57476329(-) A-I      intronic
chr16:57470917(-) A-I      intronic
chr16:57477478(-) A-I      intronic
chr16:57477229(-) A-I      intronic
chr16:57479406(-) A-I      intronic
chr16:57479262(-) A-I      intronic
chr16:57479879(-) A-I      intronic
chr16:57477547(-) A-I      intronic
chr16:57476036(-) A-I      intronic
chr16:57480039(-) A-I      intronic
chr16:57463542(-) A-I      intronic
chr16:57463846(-) A-I      intronic
chr16:57476574(-) A-I      intronic
chr16:57471031(-) A-I      intronic
chr16:57479360(-) A-I      intronic
chr16:57479937(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CIAPIN1
chr16:57476078(-) A-G intron -    22484847
chr16:57476393(-) A-G intron -    22484847
chr16:57477548(-) A-G intron -    22484847
chr16:57479895(-) A-G intron -    22484847
chr16:57479937(-) A-G intron -    22484847
chr16:57479940(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CIAPIN1
chr16:57462143-57462144(-) m6A 3'UTR       24981863
chr16:57462194-57462195(-) m6A 3'UTR       24981863
chr16:57462225-57462226(-) m6A 3'UTR       24981863
chr16:57462258-57462259(-) m6A 3'UTR       24981863
chr16:57462603-57462604(-) m6A 3'UTR       24284625
chr16:57462876-57462877(-) m6A 3'UTR       24284625//24981863
chr16:57462892-57462893(-) m6A 3'UTR       24284625//24981863
chr16:57462949-57462950(-) m6A 3'UTR       24284625//24981863
chr16:57463063-57463064(-) m6A 3'UTR       24284625
chr16:57463129-57463130(-) m6A 3'UTR//CDS//exon       24284625
chr16:57468076-57468077(-) m6A 5'UTR//CDS//exon//intron       -
chr16:57470623-57470624(-) m6A 5'UTR//CDS//exon//intron       -
chr16:57473102-57473103(-) m6A 5'UTR//CDS//exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CIAPIN1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H6-5p
Interactor2: CIAPIN1

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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