Basic Information:

  VIRBase ID:  

VHID00209986

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H6-5p:  MIMAT0015651          PPIG:  NM_004792     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H6-5p	PPIG
miRBase Accession/Entrez ID	MIMAT0015651	9360
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CARS-Cyp//CYP//SCAF10//SRCyp

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PPIG	chr2:170446455(+) A-I      intronic chr2:170443677(+) A-I      intronic chr2:170446462(+) A-I      intronic chr2:170483059(+) A-I      intronic chr2:170483043(+) A-I      intronic chr2:170483031(+) A-I      intronic chr2:170482997(+) A-I      intronic chr2:170483019(+) A-I      intronic chr2:170480756(+) A-I      intronic chr2:170480738(+) A-I      intronic chr2:170470386(+) A-I      intronic chr2:170446508(+) A-I      intronic chr2:170446504(+) A-I      intronic chr2:170483628(+) A-I      intronic chr2:170444012(+) A-I      intronic chr2:170443933(+) A-I      intronic chr2:170480697(+) A-I      intronic chr2:170478503(+) A-I      intronic chr2:170478363(+) A-I      intronic chr2:170471818(+) A-I      intronic chr2:170471701(+) A-I      intronic chr2:170470382(+) A-I      intronic chr2:170470361(+) A-I      intronic chr2:170442030(+) A-I      intronic chr2:170470350(+) A-I      intronic chr2:170470313(+) A-I      intronic chr2:170470213(+) A-I      intronic chr2:170469166(+) A-I      intronic chr2:170469099(+) A-I      intronic chr2:170469074(+) A-I      intronic chr2:170468955(+) A-I      intronic chr2:170468949(+) A-I      intronic chr2:170465904(+) A-I      intronic chr2:170465861(+) A-I      intronic chr2:170465769(+) A-I      intronic chr2:170465447(+) A-I      intronic chr2:170465338(+) A-I      intronic chr2:170459083(+) A-I      intronic chr2:170458965(+) A-I      intronic chr2:170458926(+) A-I      intronic chr2:170454930(+) A-I      intronic chr2:170454902(+) A-I      intronic chr2:170454271(+) A-I      intronic chr2:170454252(+) A-I      intronic chr2:170454125(+) A-I      intronic chr2:170454113(+) A-I      intronic chr2:170454109(+) A-I      intronic chr2:170454040(+) A-I      intronic chr2:170448964(+) A-I      intronic chr2:170448954(+) A-I      intronic chr2:170448944(+) A-I      intronic chr2:170447108(+) A-I      intronic chr2:170447073(+) A-I      intronic chr2:170442008(+) A-I      intronic chr2:170441901(+) A-I      intronic chr2:170441872(+) A-I      intronic chr2:170446992(+) A-I      intronic chr2:170441871(+) A-I      intronic chr2:170441851(+) A-I      intronic chr2:170446461(+) A-I      intronic chr2:170446458(+) A-I      intronic chr2:170444018(+) A-I      intronic chr2:170489027(+) A-I      intronic chr2:170485345(+) A-I      intronic chr2:170485195(+) A-I      intronic chr2:170485176(+) A-I      intronic chr2:170485120(+) A-I      intronic chr2:170485101(+) A-I      intronic chr2:170483816(+) A-I      intronic chr2:170483745(+) A-I      intronic chr2:170483738(+) A-I      intronic chr2:170483652(+) A-I      intronic chr2:170485371(+) A-I      intronic chr2:170464386(+) A-I      intronic chr2:170445291(+) A-I      intronic chr2:170480698(+) A-I      intronic chr2:170484056(+) A-I      intronic chr2:170446436(+) A-I      intronic chr2:170485240(+) A-I      intronic chr2:170443561(+) A-I      intronic chr2:170485188(+) A-I      intronic chr2:170484060(+) A-I      intronic chr2:170455015(+) A-I      intronic chr2:170470168(+) A-I      intronic chr2:170465846(+) A-I      intronic chr2:170485266(+) A-I      intronic chr2:170478476(+) A-I      intronic chr2:170483085(+) A-I      intronic chr2:170465473(+) A-I      intronic chr2:170454940(+) A-I      intronic chr2:170464878(+) A-I      intronic chr2:170483313(+) A-I      intronic chr2:170485139(+) A-I      intronic chr2:170485259(+) A-I      intronic chr2:170485309(+) A-I      intronic chr2:170443704(+) A-I      intronic chr2:170445249(+) A-I      intronic chr2:170446459(+) A-I      intronic chr2:170446554(+) A-I      intronic chr2:170465859(+) A-I      intronic chr2:170485349(+) A-I      intronic chr2:170443705(+) A-I      intronic chr2:170465760(+) A-I      intronic chr2:170446498(+) A-I      intronic chr2:170441958(+) A-I      intronic chr2:170455064(+) A-I      intronic chr2:170470325(+) A-I      intronic chr2:170470309(+) A-I      intronic chr2:170485181(+) A-I      intronic chr2:170484154(+) A-I      intronic chr2:170480690(+) A-I      intronic chr2:170446576(+) A-I      intronic chr2:170445315(+) A-I      intronic chr2:170470199(+) A-I      intronic chr2:170480677(+) A-I      intronic chr2:170483794(+) A-I      intronic chr2:170478328(+) A-I      intronic chr2:170455012(+) A-I      intronic chr2:170447423(+) A-I      intronic chr2:170446888(+) A-I      intronic chr2:170485172(+) A-I      intronic chr2:170443446(+) A-I      intronic chr2:170465849(+) A-I      intronic chr2:170483442(+) A-I      intronic chr2:170446365(+) A-I      intronic chr2:170489448(+) A-I      intronic chr2:170484080(+) A-I      intronic chr2:170485384(+) A-I      intronic chr2:170484058(+) A-I      intronic chr2:170485104(+) A-I      intronic chr2:170467467(+) A-I      intronic chr2:170446499(+) A-I      intronic chr2:170468534(+) A-I      intronic chr2:170446464(+) A-I      intronic chr2:170447474(+) A-I      intronic chr2:170484068(+) A-I      intronic chr2:170449133(+) A-I      intronic chr2:170454147(+) A-I      intronic chr2:170446540(+) A-I      intronic chr2:170480589(+) A-I      intronic chr2:170488980(+) A-I      intronic chr2:170465008(+) A-I      intronic chr2:170464418(+) A-I      intronic chr2:170445350(+) A-I      intronic chr2:170446434(+) A-I      intronic chr2:170470289(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PPIG	chr2:170464398(+) A-I intron -    21960545 chr2:170470271(+) A-I intron -    21960545 chr2:170485188(+) A-I intron -    21960545 chr2:170485371(+) A-I intron -    21960545 chr2:170441956(+) A-G intron -    22484847 chr2:170441958(+) A-G intron -    22484847 chr2:170443446(+) A-G intron -    22484847 chr2:170443544(+) A-G intron -    22484847 chr2:170443678(+) A-G intron -    22484847 chr2:170446464(+) A-G intron -    22484847 chr2:170448456(+) G-T intron -    22484847 chr2:170448457(+) A-T intron -    22484847 chr2:170448458(+) A-T intron -    22484847 chr2:170450339(+) G-T intron -    22484847 chr2:170451141(+) T-C intron -    22484847 chr2:170451142(+) T-C intron -    22484847 chr2:170451143(+) T-C intron -    22484847 chr2:170453401(+) A-G intron -    22484847 chr2:170455012(+) A-G intron -    22484847 chr2:170455015(+) A-G intron -    22484847 chr2:170455077(+) A-G intron -    22484847 chr2:170464511(+) A-G intron -    22484847 chr2:170465473(+) A-G intron -    22484847 chr2:170465497(+) A-G intron -    22484847 chr2:170465760(+) A-G intron -    22484847 chr2:170465822(+) A-G intron -    22484847 chr2:170465832(+) A-G intron -    22484847 chr2:170465846(+) A-G intron -    22484847 chr2:170465849(+) A-G intron -    22484847 chr2:170465859(+) A-G intron -    22484847 chr2:170465877(+) A-G intron -    22484847 chr2:170468534(+) A-G intron -    22484847 chr2:170470309(+) A-G intron -    22484847 chr2:170470325(+) A-G intron -    22484847 chr2:170478328(+) A-G intron -    22484847 chr2:170483188(+) C-T intron -    22484847 chr2:170483689(+) A-G intron -    22484847 chr2:170484058(+) A-G intron -    22484847 chr2:170484060(+) A-G intron -    22484847 chr2:170485181(+) A-G intron -    22484847 chr2:170485188(+) A-G intron -    22484847 chr2:170485329(+) A-G intron -    22484847 chr2:170485384(+) A-G intron -    22484847 chr2:170488980(+) A-G intron -    22484847 chr2:170488997(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PPIG	chr2:170440884-170440885(+) m6A 5'UTR//CDS//exon       24981863 chr2:170440963-170440964(+) m6A 5'UTR//CDS//exon       24981863 chr2:170440968-170440969(+) m6A 5'UTR//CDS//exon       24981863 chr2:170440985-170440986(+) m6A 5'UTR//CDS//exon       24981863 chr2:170441172-170441173(+) m6A 5'UTR//intron       27371828 chr2:170460740-170460741(+) m6A CDS//exon//intron       27773535 chr2:170460750-170460751(+) m6A CDS//exon//intron       27773535 chr2:170471178-170471179(+) m6A 3'UTR//CDS//intron       27773535 chr2:170487434-170487435(+) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr2:170487455-170487456(+) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr2:170488228-170488229(+) m6A exon//intron       24981863//22608085 chr2:170488415-170488416(+) m6A CDS//exon       24981863//27773535//22608085 chr2:170489750-170489751(+) m6A CDS//exon       24981863//27773535 chr2:170492610-170492611(+) m6A CDS//exon       24981863//27773535//22608085 chr2:170492655-170492656(+) m6A CDS//exon       24981863//27773535//22608085 chr2:170493017-170493018(+) m6A CDS//exon       24981863//27773535//22608085 chr2:170493050-170493051(+) m6A CDS//exon       24981863//27773535//22608085 chr2:170493077-170493078(+) m6A CDS//exon       24981863//27773535//22608085 chr2:170493116-170493117(+) m6A CDS//exon       24981863//27773535//22575960//22608085 chr2:170493195-170493196(+) m6A CDS//exon       24981863//27773535//22575960//22608085 chr2:170493330-170493331(+) m6A CDS       24981863//27773535//22575960//22608085 chr2:170493432-170493433(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr2:170493451-170493452(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr2:170493476-170493477(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr2:170493502-170493503(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr2:170493552-170493553(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:170493598-170493599(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:170493647-170493648(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:170493686-170493687(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:170493692-170493693(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:170493704-170493705(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:170493846-170493847(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr2:170493860-170493861(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr2:170493932-170493933(+) m6A CDS       24284625//24981863//27773535//22608085 chr2:170494009-170494010(+) m6A CDS       24284625//24981863//27773535//22608085 chr2:170494019-170494020(+) m6A CDS       24284625//24981863//27773535//22608085 chr2:170494046-170494047(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr2:170494084-170494085(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PPIG	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H6-5p
Interactor2: PPIG

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg