Basic Information:

  VIRBase ID:  

VHID00209239

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H6-5p:  MIMAT0015651          LIF:  NM_001257135     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H6-5p	LIF
miRBase Accession/Entrez ID	MIMAT0015651	3976
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CDF//DIA//HILDA//MLPLI

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LIF	chr22:30636813-30636814(-) m6A 3'UTR       24284625//27773535 chr22:30636949-30636950(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr22:30637024-30637025(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr22:30637080-30637081(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828 chr22:30637169-30637170(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr22:30637184-30637185(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr22:30637251-30637252(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr22:30637315-30637316(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr22:30637327-30637328(-) m6A 3'UTR       25456834//27371828//22575960 chr22:30637331-30637332(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr22:30637406-30637407(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr22:30637670-30637671(-) m6A 3'UTR       24209618 chr22:30637797-30637798(-) m6A 3'UTR       24209618//24981863 chr22:30637869-30637870(-) m6A 3'UTR       24284625//24209618//25456834//24981863 chr22:30637875-30637876(-) m6A 3'UTR       24284625//24209618//25456834//24981863 chr22:30637937-30637938(-) m6A 3'UTR       24284625//24209618//25456834//24981863 chr22:30637957-30637958(-) m6A 3'UTR       24284625//24209618//24981863 chr22:30637994-30637995(-) m6A 3'UTR       24284625//24209618//24981863 chr22:30638056-30638057(-) m6A 3'UTR       24284625//24209618 chr22:30638124-30638125(-) m6A 3'UTR       24284625 chr22:30638687-30638688(-) m6A 3'UTR       27773535 chr22:30638805-30638806(-) m6A 3'UTR       24209618//27773535 chr22:30638878-30638879(-) m6A 3'UTR       24209618 chr22:30638978-30638979(-) m6A 3'UTR       24209618//27371828 chr22:30639067-30639068(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942 chr22:30639081-30639082(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942 chr22:30639169-30639170(-) m6A 3'UTR       24284625//24209618//25456834//24981863 chr22:30639204-30639205(-) m6A 3'UTR       24284625//24209618//25456834//24981863 chr22:30639258-30639259(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr22:30639280-30639281(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr22:30639325-30639326(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr22:30639375-30639376(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr22:30639394-30639395(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr22:30639448-30639449(-) m6A 3'UTR       24209618//25456834//24981863//27371828//22608085 chr22:30639516-30639517(-) m6A 3'UTR       24209618//25456834//24981863 chr22:30639539-30639540(-) m6A 3'UTR       24209618//25456834//24981863 chr22:30639613-30639614(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr22:30639883-30639884(-) m6A CDS       24284625//24209618//24981863//26404942//27371828//22575960//22608085 chr22:30639985-30639986(-) m6A CDS       24284625//24209618//24981863//26404942//27773535 chr22:30640012-30640013(-) m6A CDS       24284625//24209618//24981863//26404942//27773535 chr22:30640804-30640805(-) m6A CDS//intron       24284625//27773535 chr22:30640887-30640888(-) m6A CDS//intron       24284625 chr22:30642733-30642734(-) m6A 5'UTR       24284625 chr22:30642743-30642744(-) m6A 5'UTR       24284625 chr22:30642831-30642832(-) m6A 5'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LIF	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H6-5p
Interactor2: LIF

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg