Basic Information:

  VIRBase ID:  

VHID00208559

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          LURAP1:  NM_001013615     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	LURAP1
miRBase Accession/Entrez ID	MIMAT0015650	541468
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C1orf190//LRAP35a//LRP35A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LURAP1	chr1:46686322(+) A-I      3'UTR chr1:46686302(+) A-I      3'UTR chr1:46674463(+) A-I      intronic chr1:46674462(+) A-I      intronic chr1:46674455(+) A-I      intronic chr1:46674454(+) A-I      intronic chr1:46674434(+) A-I      intronic chr1:46681361(+) A-I      intronic chr1:46686333(+) A-I      3'UTR chr1:46686347(+) A-I      3'UTR chr1:46686348(+) A-I      3'UTR chr1:46673004(+) A-I      intronic chr1:46682163(+) A-I      intronic chr1:46682153(+) A-I      intronic chr1:46681420(+) A-I      intronic chr1:46679897(+) A-I      intronic chr1:46679884(+) A-I      intronic chr1:46679812(+) A-I      intronic chr1:46672988(+) A-I      intronic chr1:46672853(+) A-I      intronic chr1:46670809(+) A-I      intronic chr1:46670942(+) A-I      intronic chr1:46672833(+) A-I      intronic chr1:46672846(+) A-I      intronic chr1:46672847(+) A-I      intronic chr1:46679808(+) A-I      intronic chr1:46681462(+) A-I      intronic chr1:46677654(+) A-I      intronic chr1:46677668(+) A-I      intronic chr1:46677708(+) A-I      intronic chr1:46681502(+) A-I      intronic chr1:46681494(+) A-I      intronic chr1:46681475(+) A-I      intronic chr1:46675366(+) A-I      intronic chr1:46675457(+) A-I      intronic chr1:46677551(+) A-I      intronic chr1:46672852(+) A-I      intronic chr1:46677563(+) A-I      intronic chr1:46681449(+) A-I      intronic chr1:46681441(+) A-I      intronic chr1:46681413(+) A-I      intronic chr1:46681370(+) A-I      intronic chr1:46675348(+) A-I      intronic chr1:46675286(+) A-I      intronic chr1:46675265(+) A-I      intronic chr1:46680464(+) A-I      intronic chr1:46674423(+) A-I      intronic chr1:46674419(+) A-I      intronic chr1:46680459(+) A-I      intronic chr1:46684836(+) A-I      intronic chr1:46684820(+) A-I      intronic chr1:46683436(+) A-I      intronic chr1:46683386(+) A-I      intronic chr1:46683382(+) A-I      intronic chr1:46683369(+) A-I      intronic chr1:46674500(+) A-I      intronic chr1:46683319(+) A-I      intronic chr1:46683274(+) A-I      intronic chr1:46682242(+) A-I      intronic chr1:46682197(+) A-I      intronic chr1:46682161(+) A-I      intronic chr1:46682131(+) A-I      intronic chr1:46680367(+) A-I      intronic chr1:46679907(+) A-I      intronic chr1:46679898(+) A-I      intronic chr1:46683368(+) A-I      intronic chr1:46686150(+) A-I      3'UTR chr1:46686146(+) A-I      3'UTR chr1:46686141(+) A-I      3'UTR chr1:46686235(+) A-I      3'UTR chr1:46686176(+) A-I      3'UTR chr1:46686181(+) A-I      3'UTR chr1:46686202(+) A-I      3'UTR chr1:46686188(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LURAP1	chr1:46669039-46669040(+) m6A 5'UTR       - chr1:46669107-46669108(+) m6A CDS       - chr1:46669164-46669165(+) m6A CDS       - chr1:46669212-46669213(+) m6A CDS       - chr1:46669267-46669268(+) m6A CDS       - chr1:46685554-46685555(+) m6A CDS       24209618//25456834//24981863//22608085 chr1:46685566-46685567(+) m6A CDS       24209618//25456834//24981863//22608085 chr1:46685590-46685591(+) m6A CDS       24209618//25456834//24981863//22608085 chr1:46685617-46685618(+) m6A CDS       24209618//25456834//24981863//22608085 chr1:46685645-46685646(+) m6A CDS       24209618//25456834//24981863//22608085 chr1:46685680-46685681(+) m6A CDS       24209618//25456834//24981863//22608085 chr1:46685718-46685719(+) m6A CDS       24209618//25456834//24981863//22608085 chr1:46685798-46685799(+) m6A CDS       24209618//25456834//22608085 chr1:46686609-46686610(+) m6A 3'UTR       25456834 chr1:46686615-46686616(+) m6A 3'UTR       25456834 chr1:46686624-46686625(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LURAP1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: LURAP1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg