Basic Information:

  VIRBase ID:  

VHID00208377

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          TMEM179B:  NM_001363601     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	TMEM179B
miRBase Accession/Entrez ID	MIMAT0015650	374395
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM179B	chr11:62556885-62556886(+) m6A CDS//exon       - chr11:62557778-62557779(+) m6A 3'UTR       24981863//27773535 chr11:62557784-62557785(+) m6A 3'UTR       24981863//27773535 chr11:62557790-62557791(+) m6A 3'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM179B	Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: TMEM179B

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg