Basic Information:

  VIRBase ID:  

VHID00208182

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          ADGRD1:  NM_198827     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	ADGRD1
miRBase Accession/Entrez ID	MIMAT0015650	283383
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GPR133//PGR25

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADGRD1	chr12:131483193(+) A-I      intronic chr12:131483210(+) A-I      intronic chr12:131483207(+) A-I      intronic chr12:131483190(+) A-I      intronic chr12:131608308(+) A-I      intronic chr12:131483253(+) A-I      intronic chr12:131608117(+) A-I      intronic chr12:131483065(+) A-I      intronic chr12:131608350(+) A-I      intronic chr12:131608112(+) A-I      intronic chr12:131483232(+) A-I      intronic chr12:131483176(+) A-I      intronic chr12:131483246(+) A-I      intronic chr12:131483175(+) A-I      intronic chr12:131483244(+) A-I      intronic chr12:131439634(+) A-I      intronic chr12:131461305(+) A-I      intronic chr12:131608317(+) A-I      intronic chr12:131443861(+) A-I      intronic chr12:131606006(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADGRD1	chr12:131476835-131476836(+) m6A CDS//exon       24209618 chr12:131541283-131541284(+) Cm intron       - chr12:131622426-131622427(+) m6A CDS//intron       24284625 chr12:131622705-131622706(+) m6A 3'UTR//CDS//exon       24284625 chr12:131622769-131622770(+) m6A 3'UTR//CDS//exon       24284625//24209618 chr12:131623721-131623722(+) m6A 3'UTR//CDS//exon       24284625//24209618 chr12:131623761-131623762(+) m6A 3'UTR//CDS//exon       24284625//24209618 chr12:131623845-131623846(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr12:131623859-131623860(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr12:131623890-131623891(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr12:131623913-131623914(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr12:131623935-131623936(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr12:131624069-131624070(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr12:131624126-131624127(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr12:131624142-131624143(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr12:131624210-131624211(+) m6A 3'UTR//exon       24284625//25456834 chr12:131624799-131624800(+) m6A 3'UTR//exon       24284625 chr12:131624844-131624845(+) m6A 3'UTR//exon       24284625 chr12:131624926-131624927(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr12:131624967-131624968(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr12:131624994-131624995(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr12:131625026-131625027(+) m6A 3'UTR//exon       24284625//24209618 chr12:131625517-131625518(+) m6A 3'UTR//exon       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADGRD1	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: ADGRD1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg