Basic Information:

  VIRBase ID:  

VHID00207784

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          MGAT5B:  NM_144677     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	MGAT5B
miRBase Accession/Entrez ID	MIMAT0015650	146664
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GnT-IX//GnT-VB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MGAT5B	chr17:74923439(+) A-I      intronic chr17:74923511(+) A-I      intronic chr17:74925027(+) A-I      intronic chr17:74924622(+) A-I      intronic chr17:74923584(+) A-I      intronic chr17:74890855(+) A-I      intronic chr17:74923451(+) A-I      intronic chr17:74925077(+) A-I      intronic chr17:74928315(+) A-I      intronic chr17:74923408(+) A-I      intronic chr17:74938630(+) A-I      intronic chr17:74924708(+) A-I      intronic chr17:74923422(+) A-I      intronic chr17:74912652(+) A-I      intronic chr17:74927359(+) A-I      intronic chr17:74924693(+) A-I      intronic chr17:74938378(+) A-I      intronic chr17:74934784(+) A-I      intronic chr17:74905267(+) A-I      intronic chr17:74925113(+) A-I      intronic chr17:74939762(+) A-I      intronic chr17:74923421(+) A-I      intronic chr17:74904504(+) A-I      intronic chr17:74910900(+) A-I      intronic chr17:74910820(+) A-I      intronic chr17:74932145(+) A-I      intronic chr17:74923596(+) A-I      intronic chr17:74932144(+) A-I      intronic chr17:74924767(+) A-I      intronic chr17:74910072(+) A-I      intronic chr17:74923583(+) A-I      intronic chr17:74928332(+) A-I      intronic chr17:74910166(+) A-I      intronic chr17:74925128(+) A-I      intronic chr17:74932234(+) A-I      intronic chr17:74932306(+) A-I      intronic chr17:74932312(+) A-I      intronic chr17:74923510(+) A-I      intronic chr17:74928354(+) A-I      intronic chr17:74937688(+) A-I      intronic chr17:74928387(+) A-I      intronic chr17:74937687(+) A-I      intronic chr17:74910089(+) A-I      intronic chr17:74923531(+) A-I      intronic chr17:74924511(+) A-I      intronic chr17:74910011(+) A-I      intronic chr17:74923604(+) A-I      intronic chr17:74895622(+) A-I      intronic chr17:74924525(+) A-I      intronic chr17:74927273(+) A-I      intronic chr17:74924603(+) A-I      intronic chr17:74923494(+) A-I      intronic chr17:74938291(+) A-I      intronic chr17:74924702(+) A-I      intronic chr17:74935326(+) A-I      intronic chr17:74923461(+) A-I      intronic chr17:74927453(+) A-I      intronic chr17:74928490(+) A-I      intronic chr17:74924534(+) A-I      intronic chr17:74895596(+) A-I      intronic chr17:74912616(+) A-I      intronic chr17:74927279(+) A-I      intronic chr17:74932343(+) A-I      intronic chr17:74925028(+) A-I      intronic chr17:74925137(+) A-I      intronic chr17:74923355(+) A-I      intronic chr17:74927353(+) A-I      intronic chr17:74928327(+) A-I      intronic chr17:74927362(+) A-I      intronic chr17:74910967(+) A-I      intronic chr17:74923342(+) A-I      intronic chr17:74910076(+) A-I      intronic chr17:74924527(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MGAT5B	chr17:74864554-74864555(+) m6A 5'UTR       24209618 chr17:74864682-74864683(+) m6A 5'UTR       24209618 chr17:74868848-74868849(+) m6A CDS//intron       24981863 chr17:74884904-74884905(+) Y intron       25219674 chr17:74943930-74943931(+) m6A 3'UTR//CDS//exon       24284625 chr17:74944011-74944012(+) m6A 3'UTR//CDS//exon       24284625 chr17:74944104-74944105(+) m6A 3'UTR//CDS//exon       24284625 chr17:74944146-74944147(+) m6A 3'UTR//CDS//exon       24284625 chr17:74944759-74944760(+) m6A 3'UTR//CDS//exon       24284625 chr17:74945115-74945116(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74945148-74945149(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74945182-74945183(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74945306-74945307(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74945323-74945324(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74945329-74945330(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74945424-74945425(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr17:74945492-74945493(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr17:74945605-74945606(+) m6A 3'UTR//exon       24284625 chr17:74945626-74945627(+) m6A 3'UTR//exon       24284625 chr17:74945635-74945636(+) m6A 3'UTR//exon       24284625 chr17:74945700-74945701(+) m6A 3'UTR//exon       24284625 chr17:74945892-74945893(+) m6A 3'UTR//exon       24284625//24209618 chr17:74945909-74945910(+) m6A 3'UTR//exon       24284625//24209618 chr17:74946030-74946031(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr17:74946144-74946145(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr17:74946303-74946304(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74946330-74946331(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr17:74946365-74946366(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr17:74946392-74946393(+) m6A 3'UTR//exon       24284625//25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MGAT5B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: MGAT5B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg