Basic Information:

  VIRBase ID:  

VHID00207418

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          PRRT2:  NM_001256443     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	PRRT2
miRBase Accession/Entrez ID	MIMAT0015650	112476
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BFIC2//BFIS2//DSPB3//DYT10//EKD1//FICCA//ICCA//IFITMD1//PKC

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRRT2	chr16:29822718-29822719(+) m6A exon       24981863 chr16:29823323-29823324(+) m6A 5'UTR//exon       - chr16:29823496-29823497(+) m6A 5'UTR//exon//intron       - chr16:29823540-29823541(+) m6A 5'UTR//exon//intron       25456834 chr16:29823649-29823650(+) m6A 5'UTR//intron       24284625 chr16:29823659-29823660(+) m6A 5'UTR//intron       24284625 chr16:29824468-29824469(+) m6A CDS//exon       24284625//25456834 chr16:29824502-29824503(+) m6A CDS//exon       24284625//25456834 chr16:29824532-29824533(+) m6A CDS//exon       24284625//25456834 chr16:29824553-29824554(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824585-29824586(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824594-29824595(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824615-29824616(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824631-29824632(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824682-29824683(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824696-29824697(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824707-29824708(+) m6A CDS//exon       24284625//25456834//24981863 chr16:29824736-29824737(+) m6A CDS//intron       24284625//25456834//24981863 chr16:29824773-29824774(+) m6A CDS//intron       24284625//25456834//24981863 chr16:29824802-29824803(+) m6A CDS//intron       24284625//25456834//24981863 chr16:29824868-29824869(+) m6A CDS//intron       25456834 chr16:29825803-29825804(+) m6A 3'UTR//CDS//intron       - chr16:29826237-29826238(+) m6A 3'UTR       24284625 chr16:29826256-29826257(+) m6A 3'UTR       24284625//24981863 chr16:29826266-29826267(+) m6A 3'UTR       24284625//24981863 chr16:29826349-29826350(+) m6A 3'UTR       24284625//24981863 chr16:29826639-29826640(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PRRT2	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: PRRT2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg