Basic Information:

  VIRBase ID:  

VHID00207100

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          ELOF1:  NM_001363673     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	ELOF1
miRBase Accession/Entrez ID	MIMAT0015650	84337
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ELF1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ELOF1	chr19:11667182(-) A-I      intronic chr19:11669313(-) A-I      intronic chr19:11669158(-) A-I      intronic chr19:11669134(-) A-I      intronic chr19:11669300(-) A-I      intronic chr19:11669149(-) A-I      intronic chr19:11667145(-) A-I      intronic chr19:11667651(-) A-I      intronic chr19:11669446(-) A-I      intronic chr19:11668525(-) A-I      intronic chr19:11667348(-) A-I      intronic chr19:11668354(-) A-I      intronic chr19:11669410(-) A-I      intronic chr19:11668335(-) A-I      intronic chr19:11667386(-) A-I      intronic chr19:11669339(-) A-I      intronic chr19:11669113(-) A-I      intronic chr19:11669204(-) A-I      intronic chr19:11669147(-) A-I      intronic chr19:11669340(-) A-I      intronic chr19:11667623(-) A-I      intronic chr19:11669203(-) A-I      intronic chr19:11669401(-) A-I      intronic chr19:11667226(-) A-I      intronic chr19:11669163(-) A-I      intronic chr19:11669144(-) A-I      intronic chr19:11667639(-) A-I      intronic chr19:11669327(-) A-I      intronic chr19:11669451(-) A-I      intronic chr19:11669391(-) A-I      intronic chr19:11665909(-) A-I      intronic chr19:11667177(-) A-I      intronic chr19:11668299(-) A-I      intronic chr19:11669393(-) A-I      intronic chr19:11667395(-) A-I      intronic chr19:11669409(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ELOF1	chr19:11669163(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ELOF1	chr19:11663903-11663904(-) m6A 3'UTR//intron       27773535 chr19:11664076-11664077(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22575960 chr19:11664119-11664120(-) m6A 3'UTR//intron       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr19:11664124-11664125(-) m6A 3'UTR//intron       24284625//25456834//24981863//28052920//27773535//27371828//22575960 chr19:11664150-11664151(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22575960 chr19:11664170-11664171(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22575960 chr19:11664266-11664267(-) m6A 3'UTR//intron       24284625//25456834//27773535//27371828//22575960 chr19:11664489-11664490(-) m6A 3'UTR//intron       24981863//27773535 chr19:11664548-11664549(-) m6A 3'UTR//intron       - chr19:11664614-11664615(-) m6A 3'UTR//CDS//intron       - chr19:11664812-11664813(-) m6A CDS//intron       27773535//27371828 chr19:11664893-11664894(-) m6A CDS       24284625//24981863//27773535//27371828//27773536//22575960 chr19:11665098-11665099(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr19:11665119-11665120(-) m1A CDS       26863196//26863410 chr19:11665163-11665164(-) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr19:11665444-11665445(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr19:11666506-11666507(-) m6A 5'UTR//intron       27773535 chr19:11666515-11666516(-) m6A 5'UTR//intron       27773535 chr19:11669871-11669872(-) m6A 5'UTR//intron       27773535 chr19:11669903-11669904(-) m6A 5'UTR//intron       24981863 chr19:11669957-11669958(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ELOF1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: ELOF1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg