Detail Information

Basic Information:


  VIRBase ID:  

VHID00207044

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:           SLC41A2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H5 SLC41A2
miRBase
Accession/Entrez ID		 MIMAT0015650 84102
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - SLC41A1-L1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SLC41A2
chr12:105245354(-) A-I      intronic
chr12:105245367(-) A-I      intronic
chr12:105245379(-) A-I      intronic
chr12:105254532(-) A-I      intronic
chr12:105254516(-) A-I      intronic
chr12:105245398(-) A-I      intronic
chr12:105245365(-) A-I      intronic
chr12:105245384(-) A-I      intronic
chr12:105245385(-) A-I      intronic
chr12:105208100(-) A-I      intronic
chr12:105254580(-) A-I      intronic
chr12:105245393(-) A-I      intronic
chr12:105207447(-) A-I      intronic
chr12:105245322(-) A-I      intronic
chr12:105214023(-) A-I      intronic
chr12:105214154(-) A-I      intronic
chr12:105207638(-) A-I      intronic
chr12:105247717(-) A-I      intronic
chr12:105214159(-) A-I      intronic
chr12:105214190(-) A-I      intronic
chr12:105343640(-) A-I      intronic
chr12:105326199(-) A-I      intronic
chr12:105214549(-) A-I      intronic
chr12:105214431(-) A-I      intronic
chr12:105269387(-) A-I      intronic
chr12:105342887(-) A-I      intronic
chr12:105350349(-) A-I      intronic
chr12:105349058(-) A-I      intronic
chr12:105214641(-) A-I      intronic
chr12:105328910(-) A-I      intronic
chr12:105214642(-) A-I      intronic
chr12:105214695(-) A-I      intronic
chr12:105208027(-) A-I      intronic
chr12:105348899(-) A-I      intronic
chr12:105207417(-) A-I      intronic
chr12:105243388(-) A-I      intronic
chr12:105245300(-) A-I      intronic
chr12:105207501(-) A-I      intronic
chr12:105243592(-) A-I      intronic
chr12:105334491(-) A-I      intronic
chr12:105269152(-) A-I      intronic
chr12:105328938(-) A-I      intronic
chr12:105207542(-) A-I      intronic
chr12:105342913(-) A-I      intronic
chr12:105245318(-) A-I      intronic
chr12:105247683(-) A-I      intronic
chr12:105326279(-) A-I      intronic
chr12:105207651(-) A-I      intronic
chr12:105350348(-) A-I      intronic
chr12:105207525(-) A-I      intronic
chr12:105266402(-) A-I      intronic
chr12:105329677(-) A-I      intronic
chr12:105214078(-) A-I      intronic
chr12:105334492(-) A-I      intronic
chr12:105342864(-) A-I      intronic
chr12:105334493(-) A-I      intronic
chr12:105334511(-) A-I      intronic
chr12:105207656(-) A-I      intronic
chr12:105268124(-) A-I      intronic
chr12:105269096(-) A-I      intronic
chr12:105350309(-) A-I      intronic
chr12:105207960(-) A-I      intronic
chr12:105340179(-) A-I      intronic
chr12:105326308(-) A-I      intronic
chr12:105340271(-) A-I      intronic
chr12:105329699(-) A-I      intronic
chr12:105329704(-) A-I      intronic
chr12:105207990(-) A-I      intronic
chr12:105334575(-) A-I      intronic
chr12:105208033(-) A-I      intronic
chr12:105247832(-) A-I      intronic
chr12:105334615(-) A-I      intronic
chr12:105336161(-) A-I      intronic
chr12:105336039(-) A-I      intronic
chr12:105328900(-) A-I      intronic
chr12:105333254(-) A-I      intronic
chr12:105269191(-) A-I      intronic
chr12:105329758(-) A-I      intronic
chr12:105214072(-) A-I      intronic
chr12:105330839(-) A-I      intronic
chr12:105253766(-) A-I      intronic
chr12:105326129(-) A-I      intronic
chr12:105333017(-) A-I      intronic
chr12:105342884(-) A-I      intronic
chr12:105254556(-) A-I      intronic
chr12:105208081(-) A-I      intronic
chr12:105207510(-) A-I      intronic
chr12:105340323(-) A-I      intronic
chr12:105326237(-) A-I      intronic
chr12:105333120(-) A-I      intronic
chr12:105214000(-) A-I      intronic
chr12:105340325(-) A-I      intronic
chr12:105334474(-) A-I      intronic
chr12:105326281(-) A-I      intronic
chr12:105341058(-) A-I      intronic
chr12:105326210(-) A-I      intronic
chr12:105248217(-) A-I      intronic
chr12:105348938(-) A-I      intronic
chr12:105326230(-) A-I      intronic
chr12:105349067(-) A-I      intronic
chr12:105207584(-) A-I      intronic
chr12:105349066(-) A-I      intronic
chr12:105342777(-) A-I      intronic
chr12:105326303(-) A-I      intronic
chr12:105271526(-) A-I      intronic
chr12:105208080(-) A-I      intronic
chr12:105336054(-) A-I      intronic
chr12:105214129(-) A-I      intronic
chr12:105269160(-) A-I      intronic
chr12:105326259(-) A-I      intronic
chr12:105207964(-) A-I      intronic
chr12:105342764(-) A-I      intronic
chr12:105247564(-) A-I      intronic
chr12:105350252(-) A-I      intronic
chr12:105328857(-) A-I      intronic
chr12:105207511(-) A-I      intronic
chr12:105330837(-) A-I      intronic
chr12:105268125(-) A-I      intronic
chr12:105208068(-) A-I      intronic
chr12:105214026(-) A-I      intronic
chr12:105348973(-) A-I      intronic
chr12:105329735(-) A-I      intronic
chr12:105336065(-) A-I      intronic
chr12:105336074(-) A-I      intronic
chr12:105339035(-) A-I      intronic
chr12:105214022(-) A-I      intronic
chr12:105329012(-) A-I      intronic
chr12:105333114(-) A-I      intronic
chr12:105214480(-) A-I      intronic
chr12:105328930(-) A-I      intronic
chr12:105207608(-) A-I      intronic
chr12:105207979(-) A-I      intronic
chr12:105328856(-) A-I      intronic
chr12:105247614(-) A-I      intronic
chr12:105269194(-) A-I      intronic
chr12:105350213(-) A-I      intronic
chr12:105214487(-) A-I      intronic
chr12:105333920(-) A-I      intronic
chr12:105207502(-) A-I      intronic
chr12:105340294(-) A-I      intronic
chr12:105336091(-) A-I      intronic
chr12:105207436(-) A-I      intronic
chr12:105253653(-) A-I      intronic
chr12:105214559(-) A-I      intronic
chr12:105208154(-) A-I      intronic
chr12:105333929(-) A-I      intronic
chr12:105326158(-) A-I      intronic
chr12:105328803(-) A-I      intronic
chr12:105348958(-) A-I      intronic
chr12:105247637(-) A-I      intronic
chr12:105214125(-) A-I      intronic
chr12:105348905(-) A-I      intronic
chr12:105207538(-) A-I      intronic
chr12:105342772(-) A-I      intronic
chr12:105340324(-) A-I      intronic
chr12:105207989(-) A-I      intronic
chr12:105350239(-) A-I      intronic
chr12:105214228(-) A-I      intronic
chr12:105343554(-) A-I      intronic
chr12:105329734(-) A-I      intronic
chr12:105213993(-) A-I      intronic
chr12:105252540(-) A-I      intronic
chr12:105214041(-) A-I      intronic
chr12:105339247(-) A-I      intronic
chr12:105333930(-) A-I      intronic
chr12:105214201(-) A-I      intronic
chr12:105326327(-) A-I      intronic
chr12:105269188(-) A-I      intronic
chr12:105207931(-) A-I      intronic
chr12:105348918(-) A-I      intronic
chr12:105328767(-) A-I      intronic
chr12:105269335(-) A-I      intronic
chr12:105342828(-) A-I      intronic
chr12:105333092(-) A-I      intronic
chr12:105233283(-) A-I      intronic
chr12:105247813(-) A-I      intronic
chr12:105329709(-) A-I      intronic
chr12:105207446(-) A-I      intronic
chr12:105333924(-) A-I      intronic
chr12:105329672(-) A-I      intronic
chr12:105334585(-) A-I      intronic
chr12:105334062(-) A-I      intronic
chr12:105333175(-) A-I      intronic
chr12:105336108(-) A-I      intronic
chr12:105333116(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SLC41A2
chr12:105269188(-) A-I intron -    22327324
chr12:105207446(-) A-G intron -    22484847
chr12:105207964(-) A-G intron -    22484847
chr12:105207979(-) A-G intron -    22484847
chr12:105207989(-) A-G intron -    22484847
chr12:105208154(-) A-G intron -    22484847
chr12:105213993(-) A-G intron -    22484847
chr12:105214480(-) A-G intron -    22484847
chr12:105214487(-) A-G intron -    22484847
chr12:105247564(-) A-G intron -    22484847
chr12:105269188(-) A-G intron -    22484847
chr12:105207502(-) A-G intron -    22484847
chr12:105207510(-) A-G intron -    22484847
chr12:105207511(-) A-G intron -    22484847
chr12:105207525(-) A-G intron -    22484847
chr12:105207538(-) A-G intron -    22484847
chr12:105207584(-) A-G intron -    22484847
chr12:105207608(-) A-G intron -    22484847
chr12:105207638(-) A-G intron -    22484847
chr12:105207656(-) A-G intron -    22484847
chr12:105208027(-) A-G intron -    22484847
chr12:105208068(-) A-G intron -    22484847
chr12:105208080(-) A-G intron -    22484847
chr12:105214022(-) A-G intron -    22484847
chr12:105214026(-) A-G intron -    22484847
chr12:105214041(-) A-G intron -    22484847
chr12:105214125(-) A-G intron -    22484847
chr12:105214129(-) A-G intron -    22484847
chr12:105214201(-) A-G intron -    22484847
chr12:105214228(-) A-G intron -    22484847
chr12:105214549(-) A-G intron -    22484847
chr12:105214559(-) A-G intron -    22484847
chr12:105269160(-) A-G intron -    22484847
chr12:105269194(-) A-G intron -    22484847
chr12:105269335(-) A-G intron -    22484847
chr12:105269387(-) A-G intron -    22484847
chr12:105285997(-) G-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SLC41A2
chr12:105196426-105196427(-) m6A 3'UTR       27773535
chr12:105196467-105196468(-) m6A 3'UTR       27773535
chr12:105196529-105196530(-) m6A 3'UTR       27773535
chr12:105196537-105196538(-) m6A 3'UTR       27773535
chr12:105196628-105196629(-) m6A 3'UTR       27773535
chr12:105196749-105196750(-) m6A 3'UTR       27773535
chr12:105196764-105196765(-) m6A 3'UTR       27773535
chr12:105196848-105196849(-) m6A 3'UTR       27773535
chr12:105196961-105196962(-) m6A 3'UTR       27773535
chr12:105197245-105197246(-) m6A 3'UTR       27773535
chr12:105197490-105197491(-) m6A 3'UTR       27773535
chr12:105197509-105197510(-) m6A 3'UTR       27773535
chr12:105197551-105197552(-) m6A 3'UTR       27773535
chr12:105197586-105197587(-) m6A 3'UTR       27773535
chr12:105198027-105198028(-) m6A 3'UTR       27773535
chr12:105198701-105198702(-) m6A 3'UTR       27773535
chr12:105198758-105198759(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr12:105198856-105198857(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085
chr12:105198916-105198917(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr12:105198933-105198934(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr12:105199000-105199001(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr12:105199053-105199054(-) m6A CDS//exon       24284625//24981863//27773535//22608085
chr12:105321929-105321930(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:105321938-105321939(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr12:105322082-105322083(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr12:105322138-105322139(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr12:105322147-105322148(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr12:105322213-105322214(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr12:105322226-105322227(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr12:105322268-105322269(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr12:105322389-105322390(-) m6A 5'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SLC41A2
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H5
Interactor2: SLC41A2

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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