Basic Information:

  VIRBase ID:  

VHID00206934

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          RCC1L:  NM_001281441     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	RCC1L
miRBase Accession/Entrez ID	MIMAT0015650	81554
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	WBSCR16

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RCC1L	chr7:74486370(-) A-I      intronic chr7:74463886(-) A-I      intronic chr7:74463820(-) A-I      intronic chr7:74461934(-) A-I      intronic chr7:74461933(-) A-I      intronic chr7:74463904(-) A-I      intronic chr7:74483062(-) A-I      intronic chr7:74483075(-) A-I      intronic chr7:74486843(-) A-I      intronic chr7:74483575(-) A-I      intronic chr7:74483596(-) A-I      intronic chr7:74487214(-) A-I      intronic chr7:74486921(-) A-I      intronic chr7:74486920(-) A-I      intronic chr7:74486848(-) A-I      intronic chr7:74486725(-) A-I      intronic chr7:74485484(-) A-I      intronic chr7:74486322(-) A-I      intronic chr7:74483601(-) A-I      intronic chr7:74486298(-) A-I      intronic chr7:74486237(-) A-I      intronic chr7:74486168(-) A-I      intronic chr7:74483652(-) A-I      intronic chr7:74484243(-) A-I      intronic chr7:74484769(-) A-I      intronic chr7:74485580(-) A-I      intronic chr7:74485552(-) A-I      intronic chr7:74485546(-) A-I      intronic chr7:74484779(-) A-I      intronic chr7:74484794(-) A-I      intronic chr7:74484847(-) A-I      intronic chr7:74484884(-) A-I      intronic chr7:74484953(-) A-I      intronic chr7:74485473(-) A-I      intronic chr7:74485452(-) A-I      intronic chr7:74485472(-) A-I      intronic chr7:74483028(-) A-I      intronic chr7:74477892(-) A-I      intronic chr7:74463703(-) A-I      intronic chr7:74477879(-) A-I      intronic chr7:74477835(-) A-I      intronic chr7:74463910(-) A-I      intronic chr7:74463903(-) A-I      intronic chr7:74463891(-) A-I      intronic chr7:74459123(-) A-I      intronic chr7:74461892(-) A-I      intronic chr7:74461915(-) A-I      intronic chr7:74488109(-) A-I      intronic chr7:74486150(-) A-I      intronic chr7:74483876(-) A-I      intronic chr7:74487316(-) A-I      intronic chr7:74488571(-) A-I      intronic chr7:74486852(-) A-I      intronic chr7:74484418(-) A-I      intronic chr7:74463366(-) A-I      intronic chr7:74461949(-) A-I      intronic chr7:74488149(-) A-I      intronic chr7:74465105(-) A-I      intronic chr7:74488598(-) A-I      intronic chr7:74461948(-) A-I      intronic chr7:74485147(-) A-I      intronic chr7:74487297(-) A-I      intronic chr7:74486140(-) A-I      intronic chr7:74463436(-) A-I      intronic chr7:74484335(-) A-I      intronic chr7:74485201(-) A-I      intronic chr7:74461893(-) A-I      intronic chr7:74488630(-) A-I      intronic chr7:74463406(-) A-I      intronic chr7:74485430(-) A-I      intronic chr7:74485202(-) A-I      intronic chr7:74487432(-) A-I      intronic chr7:74483277(-) A-I      intronic chr7:74488136(-) A-I      intronic chr7:74486849(-) A-I      intronic chr7:74485514(-) A-I      intronic chr7:74486273(-) A-I      intronic chr7:74463364(-) A-I      intronic chr7:74463769(-) A-I      intronic chr7:74486809(-) A-I      intronic chr7:74463772(-) A-I      intronic chr7:74486378(-) A-I      intronic chr7:74486869(-) A-I      intronic chr7:74483179(-) A-I      intronic chr7:74488062(-) A-I      intronic chr7:74484010(-) A-I      intronic chr7:74486834(-) A-I      intronic chr7:74463380(-) A-I      intronic chr7:74463404(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RCC1L	Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: RCC1L

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg