Basic Information:

  VIRBase ID:  

VHID00206810

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          NAA60:  NM_001317096     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	NAA60
miRBase Accession/Entrez ID	MIMAT0015650	79903
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HAT4//hNaa60//NAT15//NatF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NAA60	chr16:3522526(+) A-I      intronic chr16:3530716(+) A-I      intronic chr16:3530727(+) A-I      intronic chr16:3530767(+) A-I      intronic chr16:3513290(+) A-I      intronic chr16:3510428(+) A-I      intronic chr16:3513298(+) A-I      intronic chr16:3513293(+) A-I      intronic chr16:3522533(+) A-I      intronic chr16:3530763(+) A-I      intronic chr16:3511542(+) A-I      intronic chr16:3513319(+) A-I      intronic chr16:3499307(+) A-I      intronic chr16:3499331(+) A-I      intronic chr16:3499439(+) A-I      intronic chr16:3500589(+) A-I      intronic chr16:3502032(+) A-I      intronic chr16:3502058(+) A-I      intronic chr16:3503174(+) A-I      intronic chr16:3503195(+) A-I      intronic chr16:3503291(+) A-I      intronic chr16:3503319(+) A-I      intronic chr16:3503509(+) A-I      intronic chr16:3503591(+) A-I      intronic chr16:3503642(+) A-I      intronic chr16:3503668(+) A-I      intronic chr16:3503669(+) A-I      intronic chr16:3503670(+) A-I      intronic chr16:3505193(+) A-I      intronic chr16:3505459(+) A-I      intronic chr16:3506975(+) A-I      intronic chr16:3507236(+) A-I      intronic chr16:3507329(+) A-I      intronic chr16:3510438(+) A-I      intronic chr16:3510458(+) A-I      intronic chr16:3510553(+) A-I      intronic chr16:3510595(+) A-I      intronic chr16:3513394(+) A-I      intronic chr16:3513477(+) A-I      intronic chr16:3513750(+) A-I      intronic chr16:3514151(+) A-I      intronic chr16:3514159(+) A-I      intronic chr16:3514192(+) A-I      intronic chr16:3518842(+) A-I      intronic chr16:3518859(+) A-I      intronic chr16:3518965(+) A-I      intronic chr16:3518966(+) A-I      intronic chr16:3522448(+) A-I      intronic chr16:3522599(+) A-I      intronic chr16:3522615(+) A-I      intronic chr16:3523172(+) A-I      intronic chr16:3523186(+) A-I      intronic chr16:3528138(+) A-I      intronic chr16:3528148(+) A-I      intronic chr16:3530372(+) A-I      intronic chr16:3530382(+) A-I      intronic chr16:3530395(+) A-I      intronic chr16:3530396(+) A-I      intronic chr16:3530401(+) A-I      intronic chr16:3530411(+) A-I      intronic chr16:3530435(+) A-I      intronic chr16:3530529(+) A-I      intronic chr16:3530606(+) A-I      intronic chr16:3531251(+) A-I      intronic chr16:3531256(+) A-I      intronic chr16:3531264(+) A-I      intronic chr16:3531368(+) A-I      intronic chr16:3510457(+) A-I      intronic chr16:3513501(+) A-I      intronic chr16:3496268(+) A-I      intronic chr16:3496312(+) A-I      intronic chr16:3496314(+) A-I      intronic chr16:3496354(+) A-I      intronic chr16:3496368(+) A-I      intronic chr16:3496371(+) A-I      intronic chr16:3496384(+) A-I      intronic chr16:3496410(+) A-I      intronic chr16:3496451(+) A-I      intronic chr16:3496511(+) A-I      intronic chr16:3496636(+) A-I      intronic chr16:3496945(+) A-I      intronic chr16:3496994(+) A-I      intronic chr16:3498262(+) A-I      intronic chr16:3523105(+) A-I      intronic chr16:3496999(+) A-I      intronic chr16:3510639(+) A-I      intronic chr16:3511881(+) A-I      intronic chr16:3527729(+) A-I      intronic chr16:3498181(+) A-I      intronic chr16:3503305(+) A-I      intronic chr16:3495306(+) A-I      intronic chr16:3514207(+) A-I      intronic chr16:3496831(+) A-I      intronic chr16:3496971(+) A-I      intronic chr16:3530601(+) A-I      intronic chr16:3514287(+) A-I      intronic chr16:3514059(+) A-I      intronic chr16:3530325(+) A-I      intronic chr16:3510525(+) A-I      intronic chr16:3513454(+) A-I      intronic chr16:3495415(+) A-I      intronic chr16:3518807(+) A-I      intronic chr16:3501944(+) A-I      intronic chr16:3496320(+) A-I      intronic chr16:3502899(+) A-I      intronic chr16:3496872(+) A-I      intronic chr16:3502844(+) A-I      intronic chr16:3526883(+) A-I      intronic chr16:3530450(+) A-I      intronic chr16:3507060(+) A-I      intronic chr16:3511020(+) A-I      intronic chr16:3503534(+) A-I      intronic chr16:3510464(+) A-I      intronic chr16:3515012(+) A-I      intronic chr16:3531381(+) A-I      intronic chr16:3513751(+) A-I      intronic chr16:3496277(+) A-I      intronic chr16:3511929(+) A-I      intronic chr16:3521392(+) A-I      intronic chr16:3511917(+) A-I      intronic chr16:3513632(+) A-I      intronic chr16:3531324(+) A-I      intronic chr16:3498168(+) A-I      intronic chr16:3507264(+) A-I      intronic chr16:3521246(+) A-I      intronic chr16:3496276(+) A-I      intronic chr16:3502695(+) A-I      intronic chr16:3505245(+) A-I      intronic chr16:3503150(+) A-I      intronic chr16:3499397(+) A-I      intronic chr16:3500446(+) A-I      intronic chr16:3513440(+) A-I      intronic chr16:3498177(+) A-I      intronic chr16:3498194(+) A-I      intronic chr16:3496942(+) A-I      intronic chr16:3501702(+) A-I      intronic chr16:3529120(+) A-I      intronic chr16:3505108(+) A-I      intronic chr16:3499414(+) A-I      intronic chr16:3510951(+) A-I      intronic chr16:3507026(+) A-I      intronic chr16:3533854(+) A-I      intronic chr16:3531359(+) A-I      intronic chr16:3499119(+) A-I      intronic chr16:3497007(+) A-I      intronic chr16:3523153(+) A-I      intronic chr16:3514134(+) A-I      intronic chr16:3531255(+) A-I      intronic chr16:3496519(+) A-I      intronic chr16:3527938(+) A-I      intronic chr16:3496776(+) A-I      intronic chr16:3531223(+) A-I      intronic chr16:3505242(+) A-I      intronic chr16:3531270(+) A-I      intronic chr16:3530585(+) A-I      intronic chr16:3531231(+) A-I      intronic chr16:3496885(+) A-I      intronic chr16:3496675(+) A-I      intronic chr16:3495337(+) A-I      intronic chr16:3526882(+) A-I      intronic chr16:3510450(+) A-I      intronic chr16:3514252(+) A-I      intronic chr16:3523668(+) A-I      intronic chr16:3531325(+) A-I      intronic chr16:3531353(+) A-I      intronic chr16:3521341(+) A-I      intronic chr16:3510412(+) A-I      intronic chr16:3496946(+) A-I      intronic chr16:3510540(+) A-I      intronic chr16:3502509(+) A-I      intronic chr16:3513315(+) A-I      intronic chr16:3530446(+) A-I      intronic chr16:3522527(+) A-I      intronic chr16:3530586(+) A-I      intronic chr16:3529113(+) A-I      intronic chr16:3528151(+) A-I      intronic chr16:3496307(+) A-I      intronic chr16:3495537(+) A-I      intronic chr16:3522585(+) A-I      intronic chr16:3518935(+) A-I      intronic chr16:3510493(+) A-I      intronic chr16:3502510(+) A-I      intronic chr16:3510395(+) A-I      intronic chr16:3523956(+) A-I      intronic chr16:3499587(+) A-I      intronic chr16:3530605(+) A-I      intronic chr16:3515065(+) A-I      intronic chr16:3503347(+) A-I      intronic chr16:3513683(+) A-I      intronic chr16:3530447(+) A-I      intronic chr16:3496811(+) A-I      intronic chr16:3530717(+) A-I      intronic chr16:3511906(+) A-I      intronic chr16:3523175(+) A-I      intronic chr16:3495481(+) A-I      intronic chr16:3507196(+) A-I      intronic chr16:3513601(+) A-I      intronic chr16:3531153(+) A-I      intronic chr16:3498223(+) A-I      intronic chr16:3521492(+) A-I      intronic chr16:3515110(+) A-I      intronic chr16:3497045(+) A-I      intronic chr16:3495413(+) A-I      intronic chr16:3502773(+) A-I      intronic chr16:3530759(+) A-I      intronic chr16:3522453(+) A-I      intronic chr16:3530444(+) A-I      intronic chr16:3496315(+) A-I      intronic chr16:3496344(+) A-I      intronic chr16:3503434(+) A-I      intronic chr16:3495552(+) A-I      intronic chr16:3514057(+) A-I      intronic chr16:3503548(+) A-I      intronic chr16:3495490(+) A-I      intronic chr16:3511976(+) A-I      intronic chr16:3514135(+) A-I      intronic chr16:3503489(+) A-I      intronic chr16:3503310(+) A-I      intronic chr16:3530646(+) A-I      intronic chr16:3515013(+) A-I      intronic chr16:3510503(+) A-I      intronic chr16:3495338(+) A-I      intronic chr16:3511003(+) A-I      intronic chr16:3518901(+) A-I      intronic chr16:3495313(+) A-I      intronic chr16:3519021(+) A-I      intronic chr16:3502824(+) A-I      intronic chr16:3515146(+) A-I      intronic chr16:3531247(+) A-I      intronic chr16:3529143(+) A-I      intronic chr16:3526884(+) A-I      intronic chr16:3495478(+) A-I      intronic chr16:3525033(+) A-I      intronic chr16:3498151(+) A-I      intronic chr16:3495549(+) A-I      intronic chr16:3529085(+) A-I      intronic chr16:3514248(+) A-I      intronic chr16:3511663(+) A-I      intronic chr16:3511630(+) A-I      intronic chr16:3513154(+) A-I      intronic chr16:3496959(+) A-I      intronic chr16:3503535(+) A-I      intronic chr16:3496711(+) A-I      intronic chr16:3512031(+) A-I      intronic chr16:3498154(+) A-I      intronic chr16:3531311(+) A-I      intronic chr16:3513565(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NAA60	chr16:3511889(+) A-I intron -    21960545 chr16:3496315(+) A-G intron -    22484847 chr16:3512085(+) T-A intron -    22484847 chr16:3523668(+) A-G intron -    22484847 chr16:3530450(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NAA60	chr16:3451709-3451710(+) Y intron       26075521 chr16:3512632-3512633(+) m6A 5'UTR//intron       24284625//24981863 chr16:3512662-3512663(+) m6A 5'UTR//intron       24284625 chr16:3532871-3532872(+) m6A exon//intron       24209618 chr16:3533413-3533414(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535 chr16:3533467-3533468(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535 chr16:3533479-3533480(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535 chr16:3533485-3533486(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535 chr16:3533623-3533624(+) m6A exon//intron       24284625//24209618//24981863 chr16:3534700-3534701(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//22575960 chr16:3534846-3534847(+) m6A 3'UTR//CDS//exon       24284625//24209618//22575960 chr16:3535017-3535018(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960 chr16:3535022-3535023(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960 chr16:3535075-3535076(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960 chr16:3535168-3535169(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3535304-3535305(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr16:3535333-3535334(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085 chr16:3535496-3535497(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960 chr16:3535651-3535652(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3535687-3535688(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3535721-3535722(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3535763-3535764(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:3535976-3535977(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960 chr16:3536011-3536012(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr16:3536026-3536027(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr16:3536096-3536097(+) m6A 3'UTR       24284625//25456834 chr16:3536423-3536424(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3536451-3536452(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3536528-3536529(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3536636-3536637(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:3536822-3536823(+) m6A 3'UTR       24284625//24209618//24981863 chr16:3536900-3536901(+) m6A 3'UTR       24284625//24209618//24981863 chr16:3536941-3536942(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NAA60	Chromatin K562 cells     - Exosome Blood     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: NAA60

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg