Detail Information

Basic Information:


  VIRBase ID:  

VHID00206514

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:           GOLPH3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H5 GOLPH3
miRBase
Accession/Entrez ID		 MIMAT0015650 64083
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - GOPP1//GPP34//MIDAS//Vps74

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GOLPH3
chr5:32137188(-) A-I      ncRNA
chr5:32137187(-) A-I      ncRNA
chr5:32137150(-) A-I      ncRNA
chr5:32137129(-) A-I      ncRNA
chr5:32137725(-) A-I      ncRNA
chr5:32137582(-) A-I      ncRNA
chr5:32137258(-) A-I      ncRNA
chr5:32137240(-) A-I      ncRNA
chr5:32136504(-) A-I      ncRNA
chr5:32136500(-) A-I      ncRNA
chr5:32136475(-) A-I      ncRNA
chr5:32137732(-) A-I      ncRNA
chr5:32136443(-) A-I      ncRNA
chr5:32136243(-) A-I      ncRNA
chr5:32136157(-) A-I      ncRNA
chr5:32136046(-) A-I      ncRNA
chr5:32137641(-) A-I      ncRNA
chr5:32137198(-) A-I      ncRNA
chr5:32137194(-) A-I      ncRNA
chr5:32165626(-) A-I      intronic
chr5:32165667(-) A-I      intronic
chr5:32160253(-) A-I      intronic
chr5:32166798(-) A-I      intronic
chr5:32156522(-) A-I      intronic
chr5:32156497(-) A-I      intronic
chr5:32160259(-) A-I      intronic
chr5:32163102(-) A-I      intronic
chr5:32166806(-) A-I      intronic
chr5:32163567(-) A-I      intronic
chr5:32163593(-) A-I      intronic
chr5:32163677(-) A-I      intronic
chr5:32137573(-) A-I      intronic
chr5:32137562(-) A-I      intronic
chr5:32134671(-) A-I      intronic
chr5:32166827(-) A-I      intronic
chr5:32134358(-) A-I      intronic
chr5:32166832(-) A-I      intronic
chr5:32163715(-) A-I      intronic
chr5:32130096(-) A-I      intronic
chr5:32138183(-) A-I      intronic
chr5:32166869(-) A-I      intronic
chr5:32164632(-) A-I      intronic
chr5:32166891(-) A-I      intronic
chr5:32166894(-) A-I      intronic
chr5:32167410(-) A-I      intronic
chr5:32167457(-) A-I      intronic
chr5:32167496(-) A-I      intronic
chr5:32167551(-) A-I      intronic
chr5:32167557(-) A-I      intronic
chr5:32164739(-) A-I      intronic
chr5:32167916(-) A-I      intronic
chr5:32167948(-) A-I      intronic
chr5:32130086(-) A-I      intronic
chr5:32130076(-) A-I      intronic
chr5:32129176(-) A-I      intronic
chr5:32169382(-) A-I      intronic
chr5:32129166(-) A-I      intronic
chr5:32129139(-) A-I      intronic
chr5:32167434(-) A-I      intronic
chr5:32129131(-) A-I      intronic
chr5:32165098(-) A-I      intronic
chr5:32165112(-) A-I      intronic
chr5:32165134(-) A-I      intronic
chr5:32165184(-) A-I      intronic
chr5:32167425(-) A-I      intronic
chr5:32156533(-) A-I      intronic
chr5:32129078(-) A-I      intronic
chr5:32129070(-) A-I      intronic
chr5:32165185(-) A-I      intronic
chr5:32165188(-) A-I      intronic
chr5:32128729(-) A-I      intronic
chr5:32167950(-) A-I      intronic
chr5:32167973(-) A-I      intronic
chr5:32168054(-) A-I      intronic
chr5:32128723(-) A-I      intronic
chr5:32128653(-) A-I      intronic
chr5:32128648(-) A-I      intronic
chr5:32138204(-) A-I      intronic
chr5:32160222(-) A-I      intronic
chr5:32158044(-) A-I      intronic
chr5:32158020(-) A-I      intronic
chr5:32156485(-) A-I      intronic
chr5:32160236(-) A-I      intronic
chr5:32156049(-) A-I      intronic
chr5:32152421(-) A-I      intronic
chr5:32152365(-) A-I      intronic
chr5:32155329(-) A-I      intronic
chr5:32152811(-) A-I      intronic
chr5:32152744(-) A-I      intronic
chr5:32165194(-) A-I      intronic
chr5:32152329(-) A-I      intronic
chr5:32152290(-) A-I      intronic
chr5:32138229(-) A-I      intronic
chr5:32138205(-) A-I      intronic
chr5:32138180(-) A-I      intronic
chr5:32138186(-) A-I      intronic
chr5:32138185(-) A-I      intronic
chr5:32155542(-) A-I      intronic
chr5:32128636(-) A-I      intronic
chr5:32128601(-) A-I      intronic
chr5:32128572(-) A-I      intronic
chr5:32144564(-) A-I      intronic
chr5:32144525(-) A-I      intronic
chr5:32144514(-) A-I      intronic
chr5:32165561(-) A-I      intronic
chr5:32138192(-) A-I      intronic
chr5:32138188(-) A-I      intronic
chr5:32165565(-) A-I      intronic
chr5:32165602(-) A-I      intronic
chr5:32164596(-) A-I      intronic
chr5:32130112(-) A-I      intronic
chr5:32156487(-) A-I      intronic
chr5:32155470(-) A-I      intronic
chr5:32165683(-) A-I      intronic
chr5:32165108(-) A-I      intronic
chr5:32138203(-) A-I      intronic
chr5:32163673(-) A-I      intronic
chr5:32155525(-) A-I      intronic
chr5:32165154(-) A-I      intronic
chr5:32136118(-) A-I      ncRNA
chr5:32136186(-) A-I      ncRNA
chr5:32130220(-) A-I      intronic
chr5:32164787(-) A-I      intronic
chr5:32156387(-) A-I      intronic
chr5:32152409(-) A-I      intronic
chr5:32134466(-) A-I      intronic
chr5:32155432(-) A-I      intronic
chr5:32167442(-) A-I      intronic
chr5:32165577(-) A-I      intronic
chr5:32134673(-) A-I      intronic
chr5:32165567(-) A-I      intronic
chr5:32165230(-) A-I      intronic
chr5:32137136(-) A-I      ncRNA
chr5:32167835(-) A-I      intronic
chr5:32167800(-) A-I      intronic
chr5:32155420(-) A-I      intronic
chr5:32152411(-) A-I      intronic
chr5:32155515(-) A-I      intronic
chr5:32160435(-) A-I      intronic
chr5:32129075(-) A-I      intronic
chr5:32163594(-) A-I      intronic
chr5:32165199(-) A-I      intronic
chr5:32146180(-) A-I      intronic
chr5:32144574(-) A-I      intronic
chr5:32134444(-) A-I      intronic
chr5:32164683(-) A-I      intronic
chr5:32166874(-) A-I      intronic
chr5:32156526(-) A-I      intronic
chr5:32152397(-) A-I      intronic
chr5:32166696(-) A-I      intronic
chr5:32130142(-) A-I      intronic
chr5:32167454(-) A-I      intronic
chr5:32152725(-) A-I      intronic
chr5:32163592(-) A-I      intronic
chr5:32138147(-) A-I      intronic
chr5:32167415(-) A-I      intronic
chr5:32138148(-) A-I      intronic
chr5:32167455(-) A-I      intronic
chr5:32134717(-) A-I      intronic
chr5:32165226(-) A-I      intronic
chr5:32167533(-) A-I      intronic
chr5:32165279(-) A-I      intronic
chr5:32155324(-) A-I      intronic
chr5:32151464(-) A-I      intronic
chr5:32165486(-) A-I      intronic
chr5:32165444(-) A-I      intronic
chr5:32165517(-) A-I      intronic
chr5:32128567(-) A-I      intronic
chr5:32152503(-) A-I      intronic
chr5:32128637(-) A-I      intronic
chr5:32152825(-) A-I      intronic
chr5:32164677(-) A-I      intronic
chr5:32167812(-) A-I      intronic
chr5:32156501(-) A-I      intronic
chr5:32138178(-) A-I      intronic
chr5:32167497(-) A-I      intronic
chr5:32128581(-) A-I      intronic
chr5:32152504(-) A-I      intronic
chr5:32156369(-) A-I      intronic
chr5:32164638(-) A-I      intronic
chr5:32166831(-) A-I      intronic
chr5:32152432(-) A-I      intronic
chr5:32138121(-) A-I      intronic
chr5:32134217(-) A-I      intronic
chr5:32165287(-) A-I      intronic
chr5:32167936(-) A-I      intronic
chr5:32156600(-) A-I      intronic
chr5:32172701(-) A-I      intronic
chr5:32156587(-) A-I      intronic
chr5:32138237(-) A-I      intronic
chr5:32167515(-) A-I      intronic
chr5:32167416(-) A-I      intronic
chr5:32152371(-) A-I      intronic
chr5:32167974(-) A-I      intronic
chr5:32134798(-) A-I      intronic
chr5:32165607(-) A-I      intronic
chr5:32167977(-) A-I      intronic
chr5:32152801(-) A-I      intronic
chr5:32152806(-) A-I      intronic
chr5:32167343(-) A-I      intronic
chr5:32152716(-) A-I      intronic
chr5:32152805(-) A-I      intronic
chr5:32134752(-) A-I      intronic
chr5:32156374(-) A-I      intronic
chr5:32156334(-) A-I      intronic
chr5:32129122(-) A-I      intronic
chr5:32128641(-) A-I      intronic
chr5:32152308(-) A-I      intronic
chr5:32164707(-) A-I      intronic
chr5:32134432(-) A-I      intronic
chr5:32155543(-) A-I      intronic
chr5:32152722(-) A-I      intronic
chr5:32167479(-) A-I      intronic
chr5:32172941(-) A-I      intronic
chr5:32134582(-) A-I      intronic
chr5:32149858(-) A-I      intronic
chr5:32165516(-) A-I      intronic
chr5:32152632(-) A-I      intronic
chr5:32134427(-) A-I      intronic
chr5:32134379(-) A-I      intronic
chr5:32161440(-) A-I      intronic
chr5:32167345(-) A-I      intronic
chr5:32165102(-) A-I      intronic
chr5:32134678(-) A-I      intronic
chr5:32165588(-) A-I      intronic
chr5:32167860(-) A-I      intronic
chr5:32168010(-) A-I      intronic
chr5:32172682(-) A-I      intronic
chr5:32152495(-) A-I      intronic
chr5:32152460(-) A-I      intronic
chr5:32165523(-) A-I      intronic
chr5:32158057(-) A-I      intronic
chr5:32152412(-) A-I      intronic
chr5:32152415(-) A-I      intronic
chr5:32161441(-) A-I      intronic
chr5:32137763(-) A-I      ncRNA
chr5:32137726(-) A-I      ncRNA
chr5:32137087(-) A-I      ncRNA
chr5:32137171(-) A-I      ncRNA
chr5:32137177(-) A-I      ncRNA
chr5:32137625(-) A-I      ncRNA
chr5:32136063(-) A-I      ncRNA
chr5:32137238(-) A-I      ncRNA
chr5:32136149(-) A-I      ncRNA
chr5:32136159(-) A-I      ncRNA
chr5:32137665(-) A-I      ncRNA
chr5:32137210(-) A-I      ncRNA
chr5:32137678(-) A-I      ncRNA
chr5:32137760(-) A-I      ncRNA
chr5:32137679(-) A-I      ncRNA
chr5:32137602(-) A-I      ncRNA
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED GOLPH3
chr5:32136149(-) A-I intron -    15342557
chr5:32137214(-) A-I intron -    15342557
chr5:32137233(-) A-I intron -    15342557
chr5:32137238(-) A-I intron -    15342557
chr5:32137599(-) A-I intron -    15342557
chr5:32137605(-) A-I intron -    15342557
chr5:32137616(-) A-I intron -    15342557
chr5:32137625(-) A-I intron -    15342557
chr5:32137665(-) A-I intron -    15342557
chr5:32137678(-) A-I intron -    15342557
chr5:32137679(-) A-I intron -    15342557
chr5:32137682(-) A-I intron -    15342557
chr5:32137708(-) A-I intron -    15342557
chr5:32137726(-) A-I intron -    15342557
chr5:32137760(-) A-I intron -    15342557
chr5:32165606(-) A-I intron -    22327324
chr5:32155327(-) A-I intron -    21960545
chr5:32155416(-) A-I intron -    21960545
chr5:32155430(-) A-I intron -    21960545
chr5:32155432(-) A-I intron -    21960545
chr5:32155519(-) A-I intron -    21960545
chr5:32155524(-) A-I intron -    21960545
chr5:32156407(-) A-I intron -    21960545
chr5:32163539(-) A-I intron -    21960545
chr5:32166874(-) A-I intron -    21960545
chr5:32167948(-) A-I intron -    21960545
chr5:32168010(-) A-I intron -    21960545
chr5:32134582(-) A-G intron -    22484847
chr5:32134587(-) A-G intron -    22484847
chr5:32134588(-) A-G intron -    22484847
chr5:32134673(-) A-G intron -    22484847
chr5:32134678(-) A-G intron -    22484847
chr5:32134679(-) A-G intron -    22484847
chr5:32134717(-) A-G intron -    22484847
chr5:32137238(-) A-G intron -    22484847
chr5:32137247(-) A-G intron -    22484847
chr5:32137602(-) A-G intron -    22484847
chr5:32137605(-) A-G intron -    22484847
chr5:32137676(-) T-C intron -    22484847
chr5:32137678(-) A-G intron -    22484847
chr5:32137679(-) A-G intron -    22484847
chr5:32137682(-) A-G intron -    22484847
chr5:32137713(-) A-G intron -    22484847
chr5:32137760(-) A-G intron -    22484847
chr5:32137763(-) A-G intron -    22484847
chr5:32138189(-) A-G intron -    22484847
chr5:32152308(-) A-G intron -    22484847
chr5:32152371(-) A-G intron -    22484847
chr5:32152397(-) A-G intron -    22484847
chr5:32152410(-) A-G intron -    22484847
chr5:32152412(-) A-G intron -    22484847
chr5:32152415(-) A-G intron -    22484847
chr5:32152705(-) A-G intron -    22484847
chr5:32152722(-) A-G intron -    22484847
chr5:32152788(-) A-G intron -    22484847
chr5:32152805(-) A-G intron -    22484847
chr5:32152806(-) A-G intron -    22484847
chr5:32155320(-) A-G intron -    22484847
chr5:32155420(-) A-G intron -    22484847
chr5:32155430(-) A-G intron -    22484847
chr5:32155519(-) A-G intron -    22484847
chr5:32155523(-) A-G intron -    22484847
chr5:32156369(-) A-G intron -    22484847
chr5:32156374(-) A-G intron -    22484847
chr5:32156387(-) A-G intron -    22484847
chr5:32156407(-) A-G intron -    22484847
chr5:32156501(-) A-G intron -    22484847
chr5:32156526(-) A-G intron -    22484847
chr5:32156600(-) A-G intron -    22484847
chr5:32162102(-) G-A intron -    22484847
chr5:32163592(-) A-G intron -    22484847
chr5:32163594(-) A-G intron -    22484847
chr5:32164638(-) A-G intron -    22484847
chr5:32164677(-) A-G intron -    22484847
chr5:32164707(-) A-G intron -    22484847
chr5:32164787(-) A-G intron -    22484847
chr5:32165102(-) A-G intron -    22484847
chr5:32165103(-) A-G intron -    22484847
chr5:32165108(-) A-G intron -    22484847
chr5:32165138(-) A-G intron -    22484847
chr5:32165154(-) A-G intron -    22484847
chr5:32165199(-) A-G intron -    22484847
chr5:32165200(-) A-G intron -    22484847
chr5:32165226(-) A-G intron -    22484847
chr5:32165230(-) A-G intron -    22484847
chr5:32165281(-) A-G intron -    22484847
chr5:32165523(-) A-G intron -    22484847
chr5:32165567(-) A-G intron -    22484847
chr5:32165577(-) A-G intron -    22484847
chr5:32165588(-) A-G intron -    22484847
chr5:32165589(-) A-G intron -    22484847
chr5:32165606(-) A-G intron -    22484847
chr5:32165607(-) A-G intron -    22484847
chr5:32165683(-) A-G intron -    22484847
chr5:32166874(-) A-G intron -    22484847
chr5:32167343(-) A-G intron -    22484847
chr5:32167345(-) A-G intron -    22484847
chr5:32167406(-) A-G intron -    22484847
chr5:32167415(-) A-G intron -    22484847
chr5:32167416(-) A-G intron -    22484847
chr5:32167422(-) A-G intron -    22484847
chr5:32167438(-) A-G intron -    22484847
chr5:32167442(-) A-G intron -    22484847
chr5:32167446(-) A-G intron -    22484847
chr5:32167455(-) A-G intron -    22484847
chr5:32167479(-) A-G intron -    22484847
chr5:32167497(-) A-G intron -    22484847
chr5:32167515(-) A-G intron -    22484847
chr5:32167533(-) A-G intron -    22484847
chr5:32167812(-) A-G intron -    22484847
chr5:32167974(-) A-G intron -    22484847
chr5:32167977(-) A-G intron -    22484847
chr5:32168010(-) A-G intron -    22484847
chr5:32169143(-) T-C intron -    22484847
chr5:32171888(-) A-G intron -    22484847
chr5:32171891(-) A-G intron -    22484847
chr5:32172061(-) C-T intron -    22484847
chr5:32172701(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GOLPH3
chr5:32126277-32126278(-) m6A 3'UTR       24284625//24209618//24981863//22575960
chr5:32126301-32126302(-) m6A 3'UTR       24284625//24209618//24981863//22575960
chr5:32126390-32126391(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr5:32126516-32126517(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:32126636-32126637(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:32126641-32126642(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:32126675-32126676(-) m6A 3'UTR//CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:32126736-32126737(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr5:32135697-32135698(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr5:32135722-32135723(-) m6A 3'UTR//CDS//exon       24284625//24209618//27773535//22575960//22608085
chr5:32173922-32173923(-) m6A CDS//exon       24284625//24209618//24981863//27371828//27773536//22575960//22608085
chr5:32174228-32174229(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960
chr5:32174370-32174371(-) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GOLPH3
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H5
Interactor2: GOLPH3

Evidence Support:


Prediction-Evidence cRep//miRanda//RNAHybrid
Support Database RepTar//VmiReg

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