Basic Information:

  VIRBase ID:  

VHID00206086

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          DNAJA4:  NR_170654     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	DNAJA4
miRBase Accession/Entrez ID	MIMAT0015650	55466
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MST104//MSTP104//PRO1472

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DNAJA4	chr15:78567900(+) A-I      NonSyn:Glu->Gly chr15:78567856(+) A-I      Syn:Gln->Gln chr15:78567857(+) A-I      NonSyn:Lys->Glu chr15:78567858(+) A-I      NonSyn:Lys->Arg

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DNAJA4	chr15:78557098-78557099(+) m6A 5'UTR//CDS       - chr15:78557117-78557118(+) m6A CDS       - chr15:78557211-78557212(+) m6A CDS       - chr15:78557217-78557218(+) m6A CDS       - chr15:78557824-78557825(+) m6A CDS//intron       - chr15:78557830-78557831(+) m6A CDS//intron       - chr15:78566552-78566553(+) m1A 3'UTR//CDS//exon       26863196 chr15:78566645-78566646(+) m6A 3'UTR//CDS//exon       22575960 chr15:78566694-78566695(+) m6A 3'UTR//CDS//exon       - chr15:78566738-78566739(+) m1A 3'UTR//CDS//exon       26863196 chr15:78566838-78566839(+) m6A exon//intron       24981863//22608085 chr15:78566996-78566997(+) m6A exon//intron       25456834//24981863//27773535//27371828//22608085 chr15:78572603-78572604(+) m6A 3'UTR//CDS//exon       - chr15:78572725-78572726(+) m6A 3'UTR//CDS//exon       25456834//24981863//22575960 chr15:78572831-78572832(+) m6A 3'UTR//exon       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DNAJA4	Exosome Serum     25135963 Exosome Blood     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: DNAJA4

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg