Basic Information:

  VIRBase ID:  

VHID00206058

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          ZNF444:  NM_018337     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	ZNF444
miRBase Accession/Entrez ID	MIMAT0015650	55311
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EZF-2//EZF2//ZSCAN17

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF444	chr19:56656368(+) A-I      intronic chr19:56663594(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF444	chr19:56653115-56653116(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr19:56653144-56653145(+) m6A 5'UTR//intron       25456834//24981863 chr19:56653149-56653150(+) m6A 5'UTR//intron       25456834//24981863 chr19:56657616-56657617(+) m6A 5'UTR//exon//intron       25456834 chr19:56657640-56657641(+) m6A 5'UTR//exon//intron       25456834 chr19:56657673-56657674(+) m6A 5'UTR//exon//intron       25456834 chr19:56657684-56657685(+) m6A 5'UTR//exon//intron       25456834 chr19:56657758-56657759(+) m6A 5'UTR//exon//intron       25456834 chr19:56658329-56658330(+) m6A CDS//exon//intron       - chr19:56658419-56658420(+) m6A CDS//exon//intron       - chr19:56658477-56658478(+) m6A CDS//exon//intron       - chr19:56669844-56669845(+) m6A exon//intron       - chr19:56669950-56669951(+) m6A CDS//exon       - chr19:56671031-56671032(+) m6A CDS//exon       - chr19:56671155-56671156(+) m6A CDS//exon       - chr19:56671357-56671358(+) m6A CDS//exon       - chr19:56671620-56671621(+) Y 3'UTR//exon       26075521 chr19:56671706-56671707(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:56671945-56671946(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:56671952-56671953(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr19:56672110-56672111(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr19:56672174-56672175(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22608085 chr19:56672255-56672256(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF444	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: ZNF444

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg