Basic Information:

  VIRBase ID:  

VHID00206056

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          RNF121:  NR_024148     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	RNF121
miRBase Accession/Entrez ID	MIMAT0015650	55298
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RNF121	chr11:71705568(+) A-I      intronic chr11:71644106(+) A-I      intronic chr11:71695670(+) A-I      intronic chr11:71653594(+) A-I      intronic chr11:71653651(+) A-I      intronic chr11:71681587(+) A-I      intronic chr11:71680734(+) A-I      intronic chr11:71684416(+) A-I      intronic chr11:71680748(+) A-I      intronic chr11:71680833(+) A-I      intronic chr11:71653259(+) A-I      intronic chr11:71681452(+) A-I      intronic chr11:71683975(+) A-I      intronic chr11:71655268(+) A-I      intronic chr11:71672866(+) A-I      intronic chr11:71684712(+) A-I      intronic chr11:71679341(+) A-I      intronic chr11:71681468(+) A-I      intronic chr11:71684043(+) A-I      intronic chr11:71681480(+) A-I      intronic chr11:71681487(+) A-I      intronic chr11:71695907(+) A-I      intronic chr11:71657036(+) A-I      intronic chr11:71655288(+) A-I      intronic chr11:71657072(+) A-I      intronic chr11:71658014(+) A-I      intronic chr11:71664289(+) A-I      intronic chr11:71658050(+) A-I      intronic chr11:71657978(+) A-I      intronic chr11:71658396(+) A-I      intronic chr11:71656119(+) A-I      intronic chr11:71658071(+) A-I      intronic chr11:71658147(+) A-I      intronic chr11:71659440(+) A-I      intronic chr11:71660639(+) A-I      intronic chr11:71658460(+) A-I      intronic chr11:71669638(+) A-I      intronic chr11:71658179(+) A-I      intronic chr11:71660921(+) A-I      intronic chr11:71661375(+) A-I      intronic chr11:71679127(+) A-I      intronic chr11:71661443(+) A-I      intronic chr11:71681688(+) A-I      intronic chr11:71661444(+) A-I      intronic chr11:71700254(+) A-I      intronic chr11:71661449(+) A-I      intronic chr11:71661452(+) A-I      intronic chr11:71661468(+) A-I      intronic chr11:71661509(+) A-I      intronic chr11:71662070(+) A-I      intronic chr11:71662110(+) A-I      intronic chr11:71662111(+) A-I      intronic chr11:71663640(+) A-I      intronic chr11:71682175(+) A-I      intronic chr11:71682205(+) A-I      intronic chr11:71684049(+) A-I      intronic chr11:71684056(+) A-I      intronic chr11:71684057(+) A-I      intronic chr11:71663690(+) A-I      intronic chr11:71684074(+) A-I      intronic chr11:71663748(+) A-I      intronic chr11:71663762(+) A-I      intronic chr11:71664103(+) A-I      intronic chr11:71664147(+) A-I      intronic chr11:71658385(+) A-I      intronic chr11:71695467(+) A-I      intronic chr11:71664205(+) A-I      intronic chr11:71664209(+) A-I      intronic chr11:71669673(+) A-I      intronic chr11:71672457(+) A-I      intronic chr11:71672464(+) A-I      intronic chr11:71658091(+) A-I      intronic chr11:71672537(+) A-I      intronic chr11:71677135(+) A-I      intronic chr11:71695766(+) A-I      intronic chr11:71699648(+) A-I      intronic chr11:71677143(+) A-I      intronic chr11:71677146(+) A-I      intronic chr11:71679235(+) A-I      intronic chr11:71680875(+) A-I      intronic chr11:71656239(+) A-I      intronic chr11:71684207(+) A-I      intronic chr11:71677327(+) A-I      intronic chr11:71681654(+) A-I      intronic chr11:71684578(+) A-I      intronic chr11:71677607(+) A-I      intronic chr11:71696960(+) A-I      intronic chr11:71685153(+) A-I      intronic chr11:71682229(+) A-I      intronic chr11:71684313(+) A-I      intronic chr11:71653553(+) A-I      intronic chr11:71693217(+) A-I      intronic chr11:71662149(+) A-I      intronic chr11:71697835(+) A-I      intronic chr11:71684647(+) A-I      intronic chr11:71699594(+) A-I      intronic chr11:71699761(+) A-I      intronic chr11:71693289(+) A-I      intronic chr11:71684654(+) A-I      intronic chr11:71674406(+) A-I      intronic chr11:71685249(+) A-I      intronic chr11:71691462(+) A-I      intronic chr11:71691472(+) A-I      intronic chr11:71684046(+) A-I      intronic chr11:71657077(+) A-I      intronic chr11:71691473(+) A-I      intronic chr11:71696202(+) A-I      intronic chr11:71692114(+) A-I      intronic chr11:71660668(+) A-I      intronic chr11:71679368(+) A-I      intronic chr11:71685117(+) A-I      intronic chr11:71692150(+) A-I      intronic chr11:71692175(+) A-I      intronic chr11:71692231(+) A-I      intronic chr11:71663599(+) A-I      intronic chr11:71692236(+) A-I      intronic chr11:71658412(+) A-I      intronic chr11:71664219(+) A-I      intronic chr11:71700356(+) A-I      intronic chr11:71696884(+) A-I      intronic chr11:71692283(+) A-I      intronic chr11:71692318(+) A-I      intronic chr11:71692373(+) A-I      intronic chr11:71693262(+) A-I      intronic chr11:71693288(+) A-I      intronic chr11:71693301(+) A-I      intronic chr11:71681451(+) A-I      intronic chr11:71658518(+) A-I      intronic chr11:71693345(+) A-I      intronic chr11:71684068(+) A-I      intronic chr11:71684111(+) A-I      intronic chr11:71664300(+) A-I      intronic chr11:71674413(+) A-I      intronic chr11:71693353(+) A-I      intronic chr11:71695430(+) A-I      intronic chr11:71695455(+) A-I      intronic chr11:71653037(+) A-I      intronic chr11:71653120(+) A-I      intronic chr11:71653537(+) A-I      intronic chr11:71695518(+) A-I      intronic chr11:71695827(+) A-I      intronic chr11:71695830(+) A-I      intronic chr11:71673196(+) A-I      intronic chr11:71696162(+) A-I      intronic chr11:71696163(+) A-I      intronic chr11:71696961(+) A-I      intronic chr11:71653689(+) A-I      intronic chr11:71655213(+) A-I      intronic chr11:71696981(+) A-I      intronic chr11:71672428(+) A-I      intronic chr11:71697688(+) A-I      intronic chr11:71697721(+) A-I      intronic chr11:71697724(+) A-I      intronic chr11:71697740(+) A-I      intronic chr11:71697756(+) A-I      intronic chr11:71697785(+) A-I      intronic chr11:71699640(+) A-I      intronic chr11:71660927(+) A-I      intronic chr11:71699624(+) A-I      intronic chr11:71700292(+) A-I      intronic chr11:71700311(+) A-I      intronic chr11:71685172(+) A-I      intronic chr11:71655216(+) A-I      intronic chr11:71695910(+) A-I      intronic chr11:71677627(+) A-I      intronic chr11:71699572(+) A-I      intronic chr11:71677653(+) A-I      intronic chr11:71677661(+) A-I      intronic chr11:71679210(+) A-I      intronic chr11:71679232(+) A-I      intronic chr11:71695366(+) A-I      intronic chr11:71679293(+) A-I      intronic chr11:71684713(+) A-I      intronic chr11:71655220(+) A-I      intronic chr11:71679126(+) A-I      intronic chr11:71679315(+) A-I      intronic chr11:71679163(+) A-I      intronic chr11:71660664(+) A-I      intronic chr11:71679382(+) A-I      intronic chr11:71680617(+) A-I      intronic chr11:71655259(+) A-I      intronic chr11:71680678(+) A-I      intronic chr11:71680683(+) A-I      intronic chr11:71675545(+) A-I      intronic chr11:71662215(+) A-I      intronic chr11:71684047(+) A-I      intronic chr11:71680780(+) A-I      intronic chr11:71684361(+) A-I      intronic chr11:71659489(+) A-I      intronic chr11:71672448(+) A-I      intronic chr11:71682409(+) A-I      intronic chr11:71684803(+) A-I      intronic chr11:71658299(+) A-I      intronic chr11:71693331(+) A-I      intronic chr11:71700228(+) A-I      intronic chr11:71684403(+) A-I      intronic chr11:71672550(+) A-I      intronic chr11:71660928(+) A-I      intronic chr11:71691409(+) A-I      intronic chr11:71660424(+) A-I      intronic chr11:71684686(+) A-I      intronic chr11:71657059(+) A-I      intronic chr11:71658017(+) A-I      intronic chr11:71681561(+) A-I      intronic chr11:71697700(+) A-I      intronic chr11:71658375(+) A-I      intronic chr11:71662016(+) A-I      intronic chr11:71661510(+) A-I      intronic chr11:71662202(+) A-I      intronic chr11:71658292(+) A-I      intronic chr11:71653186(+) A-I      intronic chr11:71653178(+) A-I      intronic chr11:71653623(+) A-I      intronic chr11:71695451(+) A-I      intronic chr11:71658511(+) A-I      intronic chr11:71699595(+) A-I      intronic chr11:71661642(+) A-I      intronic chr11:71679205(+) A-I      intronic chr11:71684085(+) A-I      intronic chr11:71705093(+) A-I      intronic chr11:71696016(+) A-I      intronic chr11:71684091(+) A-I      intronic chr11:71679231(+) A-I      intronic chr11:71658491(+) A-I      intronic chr11:71680628(+) A-I      intronic chr11:71695534(+) A-I      intronic chr11:71697708(+) A-I      intronic chr11:71697661(+) A-I      intronic chr11:71653059(+) A-I      intronic chr11:71658490(+) A-I      intronic chr11:71697556(+) A-I      intronic chr11:71685261(+) A-I      intronic chr11:71664285(+) A-I      intronic chr11:71672447(+) A-I      intronic chr11:71669729(+) A-I      intronic chr11:71684075(+) A-I      intronic chr11:71660383(+) A-I      intronic chr11:71653253(+) A-I      intronic chr11:71681474(+) A-I      intronic chr11:71658374(+) A-I      intronic chr11:71682309(+) A-I      intronic chr11:71672445(+) A-I      intronic chr11:71700179(+) A-I      intronic chr11:71655329(+) A-I      intronic chr11:71680851(+) A-I      intronic chr11:71675663(+) A-I      intronic chr11:71696156(+) A-I      intronic chr11:71658184(+) A-I      intronic chr11:71672484(+) A-I      intronic chr11:71700396(+) A-I      intronic chr11:71693337(+) A-I      intronic chr11:71653622(+) A-I      intronic chr11:71680738(+) A-I      intronic chr11:71684816(+) A-I      intronic chr11:71684265(+) A-I      intronic chr11:71695992(+) A-I      intronic chr11:71663600(+) A-I      intronic chr11:71697564(+) A-I      intronic chr11:71693321(+) A-I      intronic chr11:71658304(+) A-I      intronic chr11:71680848(+) A-I      intronic chr11:71658043(+) A-I      intronic chr11:71699770(+) A-I      intronic chr11:71695836(+) A-I      intronic chr11:71684121(+) A-I      intronic chr11:71680676(+) A-I      intronic chr11:71682356(+) A-I      intronic chr11:71662214(+) A-I      intronic chr11:71658424(+) A-I      intronic chr11:71656133(+) A-I      intronic chr11:71672351(+) A-I      intronic chr11:71681636(+) A-I      intronic chr11:71660721(+) A-I      intronic chr11:71684408(+) A-I      intronic chr11:71681481(+) A-I      intronic chr11:71681641(+) A-I      intronic chr11:71658172(+) A-I      intronic chr11:71672421(+) A-I      intronic chr11:71684754(+) A-I      intronic chr11:71672442(+) A-I      intronic chr11:71660663(+) A-I      intronic chr11:71684430(+) A-I      intronic chr11:71695406(+) A-I      intronic chr11:71696235(+) A-I      intronic chr11:71681618(+) A-I      intronic chr11:71672405(+) A-I      intronic chr11:71655109(+) A-I      intronic chr11:71681554(+) A-I      intronic chr11:71653690(+) A-I      intronic chr11:71656983(+) A-I      intronic chr11:71660746(+) A-I      intronic chr11:71696883(+) A-I      intronic chr11:71658145(+) A-I      intronic chr11:71677088(+) A-I      intronic chr11:71696153(+) A-I      intronic chr11:71673153(+) A-I      intronic chr11:71681652(+) A-I      intronic chr11:71695724(+) A-I      intronic chr11:71677122(+) A-I      intronic chr11:71684158(+) A-I      intronic chr11:71679389(+) A-I      intronic chr11:71684128(+) A-I      intronic chr11:71658414(+) A-I      intronic chr11:71657464(+) A-I      intronic chr11:71679188(+) A-I      intronic chr11:71679206(+) A-I      intronic chr11:71680049(+) A-I      intronic chr11:71675799(+) A-I      intronic chr11:71685154(+) A-I      intronic chr11:71700293(+) A-I      intronic chr11:71696080(+) A-I      intronic chr11:71663735(+) A-I      intronic chr11:71695764(+) A-I      intronic chr11:71659397(+) A-I      intronic chr11:71657859(+) A-I      intronic chr11:71681593(+) A-I      intronic chr11:71675754(+) A-I      intronic chr11:71677159(+) A-I      intronic chr11:71662150(+) A-I      intronic chr11:71664315(+) A-I      intronic chr11:71681653(+) A-I      intronic chr11:71696174(+) A-I      intronic chr11:71695750(+) A-I      intronic chr11:71641897(+) A-I      intronic chr11:71653118(+) A-I      intronic chr11:71694385(+) A-I      intronic chr11:71684157(+) A-I      intronic chr11:71703044(+) A-I      intronic chr11:71696906(+) A-I      intronic chr11:71694384(+) A-I      intronic chr11:71660506(+) A-I      intronic chr11:71681657(+) A-I      intronic chr11:71655232(+) A-I      intronic chr11:71673155(+) A-I      intronic chr11:71653554(+) A-I      intronic chr11:71692159(+) A-I      intronic chr11:71700361(+) A-I      intronic chr11:71659511(+) A-I      intronic chr11:71648385(+) A-I      intronic chr11:71692234(+) A-I      intronic chr11:71700174(+) A-I      intronic chr11:71681588(+) A-I      intronic chr11:71660997(+) A-I      intronic chr11:71678683(+) A-I      intronic chr11:71695662(+) A-I      intronic chr11:71657082(+) A-I      intronic chr11:71684127(+) A-I      intronic chr11:71679245(+) A-I      intronic chr11:71684071(+) A-I      intronic chr11:71657085(+) A-I      intronic chr11:71696170(+) A-I      intronic chr11:71684112(+) A-I      intronic chr11:71661828(+) A-I      intronic chr11:71693235(+) A-I      intronic chr11:71692224(+) A-I      intronic chr11:71684753(+) A-I      intronic chr11:71653608(+) A-I      intronic chr11:71664183(+) A-I      intronic chr11:71697559(+) A-I      intronic chr11:71657994(+) A-I      intronic chr11:71659400(+) A-I      intronic chr11:71684267(+) A-I      intronic chr11:71680783(+) A-I      intronic chr11:71696061(+) A-I      intronic chr11:71699668(+) A-I      intronic chr11:71697664(+) A-I      intronic chr11:71693193(+) A-I      intronic chr11:71695751(+) A-I      intronic chr11:71684360(+) A-I      intronic chr11:71658298(+) A-I      intronic chr11:71681511(+) A-I      intronic chr11:71699731(+) A-I      intronic chr11:71653648(+) A-I      intronic chr11:71661403(+) A-I      intronic chr11:71696861(+) A-I      intronic chr11:71696968(+) A-I      intronic chr11:71672486(+) A-I      intronic chr11:71679367(+) A-I      intronic chr11:71697704(+) A-I      intronic chr11:71680739(+) A-I      intronic chr11:71659306(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RNF121	chr11:71673213(+) A-I exon 5'UTR    15258596 chr11:71673221(+) A-I exon 5'UTR    15258596 chr11:71673225(+) A-I exon 5'UTR    15258596 chr11:71673284(+) A-I exon 5'UTR    15258596 chr11:71658412(+) A-I intron -    22327324 chr11:71680739(+) A-I intron -    22327324 chr11:71681481(+) A-I intron -    22327324 chr11:71699572(+) A-I intron -    22327324 chr11:71699648(+) A-I intron -    22327324 chr11:71699698(+) A-I intron -    22327324 chr11:71694384(+) A-G intron -    22484847 chr11:71657077(+) A-G intron -    22484847 chr11:71657082(+) A-G intron -    22484847 chr11:71658298(+) A-G intron -    22484847 chr11:71658299(+) A-G intron -    22484847 chr11:71658374(+) A-G intron -    22484847 chr11:71658385(+) A-G intron -    22484847 chr11:71658412(+) A-G intron -    22484847 chr11:71658414(+) A-G intron -    22484847 chr11:71658424(+) A-G intron -    22484847 chr11:71658490(+) A-G intron -    22484847 chr11:71658491(+) A-G intron -    22484847 chr11:71658511(+) A-G intron -    22484847 chr11:71660663(+) A-G intron -    22484847 chr11:71660927(+) A-G intron -    22484847 chr11:71672351(+) A-G intron -    22484847 chr11:71672447(+) A-G intron -    22484847 chr11:71673221(+) A-G exon 5'UTR    22484847 chr11:71679231(+) A-G intron -    22484847 chr11:71681481(+) A-G intron -    22484847 chr11:71681561(+) A-G intron -    22484847 chr11:71681587(+) A-G intron -    22484847 chr11:71681588(+) A-G intron -    22484847 chr11:71681618(+) A-G intron -    22484847 chr11:71681641(+) A-G intron -    22484847 chr11:71681652(+) A-G intron -    22484847 chr11:71681653(+) A-G intron -    22484847 chr11:71681654(+) A-G intron -    22484847 chr11:71684071(+) A-G intron -    22484847 chr11:71684111(+) A-G intron -    22484847 chr11:71684112(+) A-G intron -    22484847 chr11:71684121(+) A-G intron -    22484847 chr11:71684360(+) A-G intron -    22484847 chr11:71684361(+) A-G intron -    22484847 chr11:71692159(+) A-G intron -    22484847 chr11:71693193(+) A-G intron -    22484847 chr11:71693235(+) A-G intron -    22484847 chr11:71693321(+) A-G intron -    22484847 chr11:71693337(+) A-G intron -    22484847 chr11:71696861(+) A-G intron -    22484847 chr11:71696883(+) A-G intron -    22484847 chr11:71696968(+) A-G intron -    22484847 chr11:71697559(+) A-G intron -    22484847 chr11:71699572(+) A-G intron -    22484847 chr11:71699624(+) A-G intron -    22484847 chr11:71699648(+) A-G intron -    22484847 chr11:71699668(+) A-G intron -    22484847 chr11:71699698(+) A-G intron -    22484847 chr11:71700361(+) A-G intron -    22484847 chr11:71700396(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNF121	chr11:71640080-71640081(+) m6A 5'UTR       25456834//24981863 chr11:71706572-71706573(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//22575960//22608085 chr11:71707278-71707279(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71707383-71707384(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr11:71707403-71707404(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr11:71707435-71707436(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr11:71707453-71707454(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71707481-71707482(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71707500-71707501(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71707568-71707569(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71707594-71707595(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr11:71707718-71707719(+) m6A 3'UTR       24284625 chr11:71707884-71707885(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71707891-71707892(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71707956-71707957(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr11:71708025-71708026(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RNF121	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: RNF121

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg