Basic Information:

  VIRBase ID:  

VHID00205751

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          ISYNA1:  NR_045573     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	ISYNA1
miRBase Accession/Entrez ID	MIMAT0015650	51477
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	INO1//INOS//IPS//IPS 1//IPS-1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ISYNA1	chr19:18545278-18545279(-) m6A 3'UTR       24284625//24981863//22575960//22608085 chr19:18545357-18545358(-) m6A 3'UTR       24284625//24981863//22608085 chr19:18545363-18545364(-) m6A 3'UTR       24284625//24981863//22608085 chr19:18545377-18545378(-) m6A 3'UTR       24284625//24981863 chr19:18545426-18545427(-) m6A 3'UTR       - chr19:18545431-18545432(-) m6A 3'UTR       - chr19:18545492-18545493(-) m6A 3'UTR       - chr19:18545696-18545697(-) Y 3'UTR//exon       26075521 chr19:18545803-18545804(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535 chr19:18545813-18545814(-) m6A 3'UTR//CDS//exon       24981863//28052920//27773535 chr19:18545842-18545843(-) m6A 3'UTR//CDS//exon       24981863//27773535 chr19:18545884-18545885(-) m6A 3'UTR//CDS//exon       - chr19:18545900-18545901(-) m6A 3'UTR//CDS//exon       - chr19:18546084-18546085(-) m6A 3'UTR//CDS//exon       - chr19:18546193-18546194(-) m6A 3'UTR//CDS//exon       27773536 chr19:18546207-18546208(-) m6A 3'UTR//CDS//exon       27773536 chr19:18546261-18546262(-) m6A 3'UTR//CDS//exon       27773536 chr19:18546291-18546292(-) m6A 3'UTR//CDS//exon       24981863//27773536 chr19:18547209-18547210(-) m6A 3'UTR//CDS//exon       - chr19:18547236-18547237(-) m6A 3'UTR//CDS//exon       - chr19:18547260-18547261(-) m6A 3'UTR//CDS//exon       - chr19:18547269-18547270(-) m6A 3'UTR//CDS//exon       - chr19:18547385-18547386(-) m6A exon//intron       27773535 chr19:18547524-18547525(-) m6A 3'UTR//CDS//exon//intron       - chr19:18547629-18547630(-) m6A 3'UTR//CDS//exon//intron       - chr19:18547665-18547666(-) m6A 3'UTR//CDS//exon//intron       - chr19:18547680-18547681(-) m6A CDS//exon//intron       - chr19:18548028-18548029(-) m6A 5'UTR//intron       - chr19:18548484-18548485(-) m6A CDS//exon//intron       27773536 chr19:18548536-18548537(-) m6A CDS//exon//intron       27773536 chr19:18548600-18548601(-) m6A CDS//intron       27773536 chr19:18548664-18548665(-) m6A CDS//intron       27773536 chr19:18548864-18548865(-) m6A 5'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ISYNA1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: ISYNA1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg