Basic Information:

  VIRBase ID:  

VHID00205631

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          COL5A3:  NM_015719     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	COL5A3
miRBase Accession/Entrez ID	MIMAT0015650	50509
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	COL5A3	chr19:10115939(-) A-I      intronic chr19:10100556(-) A-I      intronic chr19:10100948(-) A-I      intronic chr19:10100958(-) A-I      intronic chr19:10100970(-) A-I      intronic chr19:10115176(-) A-I      intronic chr19:10115182(-) A-I      intronic chr19:10101823(-) A-I      intronic chr19:10115186(-) A-I      intronic chr19:10115200(-) A-I      intronic chr19:10115201(-) A-I      intronic chr19:10115202(-) A-I      intronic chr19:10115210(-) A-I      intronic chr19:10115211(-) A-I      intronic chr19:10100907(-) A-I      intronic chr19:10100913(-) A-I      intronic chr19:10115943(-) A-I      intronic chr19:10115921(-) A-I      intronic chr19:10100975(-) A-I      intronic chr19:10100616(-) A-I      intronic chr19:10094141(-) A-I      intronic chr19:10094122(-) A-I      intronic chr19:10094088(-) A-I      intronic chr19:10093918(-) A-I      intronic chr19:10076330(-) A-I      intronic chr19:10074642(-) A-I      intronic chr19:10074588(-) A-I      intronic chr19:10075181(-) A-I      intronic chr19:10074096(-) A-I      intronic chr19:10073967(-) A-I      intronic chr19:10076416(-) A-I      intronic chr19:10100825(-) A-I      intronic chr19:10101644(-) A-I      intronic chr19:10101788(-) A-I      intronic chr19:10074586(-) A-I      intronic chr19:10093913(-) A-I      intronic chr19:10076298(-) A-I      intronic chr19:10094091(-) A-I      intronic chr19:10076266(-) A-I      intronic chr19:10076764(-) A-I      intronic chr19:10074682(-) A-I      intronic chr19:10074978(-) A-I      intronic chr19:10093921(-) A-I      intronic chr19:10094815(-) A-I      intronic chr19:10075719(-) A-I      intronic chr19:10085711(-) A-I      intronic chr19:10100826(-) A-I      intronic chr19:10074348(-) A-I      intronic chr19:10074007(-) A-I      intronic chr19:10075642(-) A-I      intronic chr19:10101904(-) A-I      intronic chr19:10093967(-) A-I      intronic chr19:10094168(-) A-I      intronic chr19:10115770(-) A-I      intronic chr19:10093756(-) A-I      intronic chr19:10093960(-) A-I      intronic chr19:10101856(-) A-I      intronic chr19:10115135(-) A-I      intronic chr19:10093600(-) A-I      intronic chr19:10074208(-) A-I      intronic chr19:10094133(-) A-I      intronic chr19:10093643(-) A-I      intronic chr19:10075249(-) A-I      intronic chr19:10075244(-) A-I      intronic chr19:10074354(-) A-I      intronic chr19:10094062(-) A-I      intronic chr19:10100623(-) A-I      intronic chr19:10075923(-) A-I      intronic chr19:10093771(-) A-I      intronic chr19:10075130(-) A-I      intronic chr19:10074364(-) A-I      intronic chr19:10094114(-) A-I      intronic chr19:10073951(-) A-I      intronic chr19:10094065(-) A-I      intronic chr19:10115767(-) A-I      intronic chr19:10094074(-) A-I      intronic chr19:10094135(-) A-I      intronic chr19:10075649(-) A-I      intronic chr19:10074727(-) A-I      intronic chr19:10093670(-) A-I      intronic chr19:10075921(-) A-I      intronic chr19:10093647(-) A-I      intronic chr19:10115840(-) A-I      intronic chr19:10100552(-) A-I      intronic chr19:10075927(-) A-I      intronic chr19:10100561(-) A-I      intronic chr19:10076244(-) A-I      intronic chr19:10093777(-) A-I      intronic chr19:10115145(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	COL5A3	chr19:10071065-10071066(-) m6A 3'UTR       25456834 chr19:10071113-10071114(-) m6A CDS       25456834 chr19:10071132-10071133(-) m6A CDS       25456834 chr19:10071211-10071212(-) m6A CDS       25456834 chr19:10071221-10071222(-) m6A CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	COL5A3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: COL5A3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg