Detail Information

Basic Information:


  VIRBase ID:  

VHID00205035

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:           LYPLA2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H5 LYPLA2
miRBase
Accession/Entrez ID
MIMAT0015650 11313
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - APT-2//APT2//DJ886K2.4

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LYPLA2
chr1:24117637-24117638(+) m6A 5'UTR       25456834//24981863
chr1:24119047-24119048(+) m6A 5'UTR//intron       25456834//24981863
chr1:24120417-24120418(+) m6A CDS//exon//intron       -
chr1:24121536-24121537(+) m6A 3'UTR//exon       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate LYPLA2
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H5
Interactor2: LYPLA2

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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