Basic Information:

  VIRBase ID:  

VHID00203742

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          RHD:  NM_001282869     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	RHD
miRBase Accession/Entrez ID	MIMAT0015650	6007
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD240D//DIIIc//RH//RH30//Rh4//RHCED//RhDCw//RHDel//RHDVA(TT)//RhII//RhK562-II//RhPI//RHPII//RHXIII

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RHD	chr1:25647291(+) A-I      intronic chr1:25641062(+) A-I      intronic chr1:25647401(+) A-I      intronic chr1:25626310(+) A-I      intronic chr1:25626334(+) A-I      intronic chr1:25626318(+) A-I      intronic chr1:25648106(+) A-I      intronic chr1:25646623(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RHD	chr1:25632025(+) T-C intron -    22484847 chr1:25632127(+) T-C intron -    22484847 chr1:25632165(+) T-C intron -    22484847 chr1:25632230(+) T-C intron -    22484847 chr1:25632256(+) T-C intron -    22484847 chr1:25632266(+) T-C intron -    22484847 chr1:25632270(+) T-C intron -    22484847 chr1:25632311(+) T-C intron -    22484847 chr1:25632312(+) T-C intron -    22484847 chr1:25632324(+) T-C intron -    22484847 chr1:25637275(+) T-C intron -    22484847 chr1:25637291(+) T-C intron -    22484847 chr1:25637294(+) T-C intron -    22484847 chr1:25637306(+) T-C intron -    22484847 chr1:25639001(+) T-C intron -    22484847 chr1:25639053(+) T-C intron -    22484847 chr1:25639063(+) T-C intron -    22484847 chr1:25639119(+) T-C intron -    22484847 chr1:25639125(+) T-C intron -    22484847 chr1:25641017(+) T-C intron -    22484847 chr1:25641048(+) T-C intron -    22484847 chr1:25641052(+) T-C intron -    22484847 chr1:25641122(+) T-C intron -    22484847 chr1:25641141(+) T-C intron -    22484847 chr1:25641149(+) T-C intron -    22484847 chr1:25641200(+) T-C intron -    22484847 chr1:25641268(+) T-C intron -    22484847 chr1:25641531(+) T-C intron -    22484847 chr1:25641551(+) T-C intron -    22484847 chr1:25641560(+) T-C intron -    22484847 chr1:25641573(+) T-C intron -    22484847 chr1:25642259(+) T-C intron -    22484847 chr1:25642260(+) T-C intron -    22484847 chr1:25642854(+) T-C intron -    22484847 chr1:25642928(+) T-C intron -    22484847 chr1:25644551(+) T-C intron -    22484847 chr1:25644630(+) T-C intron -    22484847 chr1:25644633(+) T-C intron -    22484847 chr1:25644645(+) T-C intron -    22484847 chr1:25644647(+) T-C intron -    22484847 chr1:25644650(+) T-C intron -    22484847 chr1:25644717(+) T-C intron -    22484847 chr1:25644718(+) T-C intron -    22484847 chr1:25644721(+) T-C intron -    22484847 chr1:25645872(+) T-C intron -    22484847 chr1:25646457(+) T-C intron -    22484847 chr1:25646482(+) T-C intron -    22484847 chr1:25646487(+) T-C intron -    22484847 chr1:25646492(+) T-C intron -    22484847 chr1:25646623(+) A-G intron -    22484847 chr1:25647483(+) T-C intron -    22484847 chr1:25647926(+) T-C intron -    22484847 chr1:25650028(+) T-C intron -    22484847 chr1:25650241(+) T-C intron -    22484847 chr1:25650243(+) T-C intron -    22484847 chr1:25655916(+) T-C intron -    22484847 chr1:25655927(+) T-C intron -    22484847 chr1:25656023(+) T-C intron -    22484847 chr1:25656351(+) T-C intron -    22484847 chr1:25656437(+) T-C intron -    22484847

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RHD	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: RHD

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid
Support Database	RepTar//VmiReg