Basic Information:

  VIRBase ID:  

VHID00203535

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          PFKP:  NM_001242339     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	PFKP
miRBase Accession/Entrez ID	MIMAT0015650	5214
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATP-PFK//PFK-C//PFK-P//PFKF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PFKP	chr10:3175723(+) A-I      intronic chr10:3175716(+) A-I      intronic chr10:3131279(+) A-I      intronic chr10:3117839(+) A-I      intronic chr10:3117845(+) A-I      intronic chr10:3175709(+) A-I      intronic chr10:3131273(+) A-I      intronic chr10:3175703(+) A-I      intronic chr10:3117862(+) A-I      intronic chr10:3117875(+) A-I      intronic chr10:3131263(+) A-I      intronic chr10:3175702(+) A-I      intronic chr10:3131305(+) A-I      intronic chr10:3131299(+) A-I      intronic chr10:3131290(+) A-I      intronic chr10:3175722(+) A-I      intronic chr10:3164107(+) A-I      intronic chr10:3113042(+) A-I      intronic chr10:3140067(+) A-I      intronic chr10:3117974(+) A-I      intronic chr10:3116155(+) A-I      intronic chr10:3178389(+) A-I      intronic chr10:3117853(+) A-I      intronic chr10:3178335(+) A-I      intronic chr10:3144747(+) A-I      intronic chr10:3133820(+) A-I      intronic chr10:3144709(+) A-I      intronic chr10:3117970(+) A-I      intronic chr10:3164126(+) A-I      intronic chr10:3178427(+) A-I      intronic chr10:3118132(+) A-I      intronic chr10:3111820(+) A-I      intronic chr10:3116213(+) A-I      intronic chr10:3144322(+) A-I      intronic chr10:3144266(+) A-I      intronic chr10:3144680(+) A-I      intronic chr10:3144256(+) A-I      intronic chr10:3136011(+) A-I      intronic chr10:3135929(+) A-I      intronic chr10:3133924(+) A-I      intronic chr10:3133884(+) A-I      intronic chr10:3144354(+) A-I      intronic chr10:3133821(+) A-I      intronic chr10:3133768(+) A-I      intronic chr10:3117885(+) A-I      intronic chr10:3133846(+) A-I      intronic chr10:3133745(+) A-I      intronic chr10:3122659(+) A-I      intronic chr10:3122463(+) A-I      intronic chr10:3113161(+) A-I      intronic chr10:3144332(+) A-I      intronic chr10:3122454(+) A-I      intronic chr10:3144328(+) A-I      intronic chr10:3117976(+) A-I      intronic chr10:3111836(+) A-I      intronic chr10:3140746(+) A-I      intronic chr10:3133751(+) A-I      intronic chr10:3144867(+) A-I      intronic chr10:3113205(+) A-I      intronic chr10:3117840(+) A-I      intronic chr10:3117917(+) A-I      intronic chr10:3144745(+) A-I      intronic chr10:3113204(+) A-I      intronic chr10:3118017(+) A-I      intronic chr10:3144735(+) A-I      intronic chr10:3144833(+) A-I      intronic chr10:3117950(+) A-I      intronic chr10:3117999(+) A-I      intronic chr10:3116124(+) A-I      intronic chr10:3111825(+) A-I      intronic chr10:3124972(+) A-I      intronic chr10:3116229(+) A-I      intronic chr10:3144732(+) A-I      intronic chr10:3118022(+) A-I      intronic chr10:3145714(+) A-I      intronic chr10:3121450(+) A-I      intronic chr10:3145746(+) A-I      intronic chr10:3136042(+) A-I      intronic chr10:3144642(+) A-I      intronic chr10:3144824(+) A-I      intronic chr10:3144706(+) A-I      intronic chr10:3162921(+) A-I      intronic chr10:3113140(+) A-I      intronic chr10:3144798(+) A-I      intronic chr10:3113217(+) A-I      intronic chr10:3116109(+) A-I      intronic chr10:3139997(+) A-I      intronic chr10:3117909(+) A-I      intronic chr10:3125043(+) A-I      intronic chr10:3145803(+) A-I      intronic chr10:3113123(+) A-I      intronic chr10:3122455(+) A-I      intronic chr10:3111846(+) A-I      intronic chr10:3116156(+) A-I      intronic chr10:3175687(+) A-I      intronic chr10:3112973(+) A-I      intronic chr10:3117916(+) A-I      intronic chr10:3116130(+) A-I      intronic chr10:3144705(+) A-I      intronic chr10:3113149(+) A-I      intronic chr10:3162938(+) A-I      intronic chr10:3140054(+) A-I      intronic chr10:3113062(+) A-I      intronic chr10:3140613(+) A-I      intronic chr10:3133845(+) A-I      intronic chr10:3122447(+) A-I      intronic chr10:3168182(+) A-I      intronic chr10:3168206(+) A-I      intronic chr10:3168180(+) A-I      intronic chr10:3168177(+) A-I      intronic chr10:3168183(+) A-I      intronic chr10:3133978(+) A-I      intronic chr10:3168677(+) A-I      intronic chr10:3168694(+) A-I      intronic chr10:3168198(+) A-I      intronic chr10:3144710(+) A-I      intronic chr10:3168706(+) A-I      intronic chr10:3144751(+) A-I      intronic chr10:3167803(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PFKP	chr10:3113123(+) A-I intron -    22327324 chr10:3144867(+) A-I intron -    22327324 chr10:3113123(+) A-G intron -    22484847 chr10:3118017(+) A-G intron -    22484847 chr10:3133751(+) A-G intron -    22484847 chr10:3140613(+) A-G intron -    22484847 chr10:3144833(+) A-G intron -    22484847 chr10:3144867(+) A-G intron -    22484847 chr10:3164107(+) A-G intron -    22484847 chr10:3164126(+) A-G intron -    22484847 chr10:3168677(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PFKP	chr10:3110849-3110850(+) m6A 5'UTR//intron       24284625//24981863 chr10:3111438-3111439(+) m6A exon//intron       24284625 chr10:3111519-3111520(+) m6A 5'UTR//exon//intron       24284625//24209618//24981863 chr10:3111561-3111562(+) m6A 5'UTR//exon//intron       24284625//24209618//24981863 chr10:3112498-3112499(+) m6A 5'UTR//intron       24284625//24209618 chr10:3141497-3141498(+) m6A CDS//exon       24284625//22575960 chr10:3146078-3146079(+) m6A CDS//exon       24284625//26404942//22575960 chr10:3147622-3147623(+) m6A CDS//exon       24284625 chr10:3147683-3147684(+) m6A CDS//exon       24284625//26404942 chr10:3149473-3149474(+) m6A CDS       24284625//26404942//22575960 chr10:3149489-3149490(+) Am CDS       - chr10:3150958-3150959(+) m6A CDS       24284625//26404942//22575960 chr10:3151598-3151599(+) m6A CDS       24284625//22575960 chr10:3151631-3151632(+) m6A CDS       24284625//22575960 chr10:3154463-3154464(+) Y CDS       25219674 chr10:3155330-3155331(+) m6A CDS       24284625//22575960 chr10:3158985-3158986(+) m6A CDS       24284625//22575960 chr10:3159003-3159004(+) m6A CDS       24284625//22575960 chr10:3159030-3159031(+) m6A CDS       24284625//22575960 chr10:3162094-3162095(+) m6A CDS//intron       24284625//22575960 chr10:3162210-3162211(+) m6A CDS//intron       24284625//22575960 chr10:3162222-3162223(+) m6A CDS//intron       24284625//22575960 chr10:3165436-3165437(+) Am intron       - chr10:3171305-3171306(+) m6A 5'UTR//intron       - chr10:3171586-3171587(+) m6A 5'UTR//intron       24284625 chr10:3171602-3171603(+) m6A 5'UTR//intron       24284625 chr10:3171669-3171670(+) m6A 5'UTR//intron       24284625 chr10:3171778-3171779(+) m6A 5'UTR//intron       24284625 chr10:3171824-3171825(+) m6A 5'UTR//intron       24284625 chr10:3171894-3171895(+) m6A 5'UTR//intron       24284625 chr10:3172010-3172011(+) m6A 5'UTR//CDS       22575960 chr10:3172043-3172044(+) m6A 5'UTR//CDS       22575960 chr10:3172070-3172071(+) m6A 5'UTR//CDS       22575960 chr10:3174592-3174593(+) Gm CDS       - chr10:3174604-3174605(+) m6A CDS       26404942//22575960 chr10:3175414-3175415(+) m6A CDS       22575960 chr10:3176702-3176703(+) m6A CDS       22575960 chr10:3176710-3176711(+) m6A CDS       22575960 chr10:3176751-3176752(+) m6A CDS       22575960 chr10:3177479-3177480(+) Y intron       25192136 chr10:3178659-3178660(+) m6A CDS//intron       26404942 chr10:3178730-3178731(+) m6A CDS//intron       26404942//22575960 chr10:3178746-3178747(+) m6A CDS//intron       26404942//22575960 chr10:3178807-3178808(+) m6A 3'UTR//intron       24284625//26404942//22575960 chr10:3178974-3178975(+) m6A 3'UTR//intron       24284625 chr10:3179762-3179763(+) m6A 3'UTR       24284625 chr10:3179777-3179778(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PFKP	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: PFKP

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg