Basic Information:

  VIRBase ID:  

VHID00203165

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H5:  MIMAT0015650          ITPKA:  NM_002220     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H5	ITPKA
miRBase Accession/Entrez ID	MIMAT0015650	3706
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IP3-3KA//IP3KA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ITPKA	chr15:41790289(+) A-I      intronic chr15:41792252(+) A-I      intronic chr15:41789566(+) A-I      intronic chr15:41790236(+) A-I      intronic chr15:41790270(+) A-I      intronic chr15:41790271(+) A-I      intronic chr15:41790279(+) A-I      intronic chr15:41790283(+) A-I      intronic chr15:41792324(+) A-I      intronic chr15:41789700(+) A-I      intronic chr15:41792284(+) A-I      intronic chr15:41792944(+) A-I      intronic chr15:41792418(+) A-I      intronic chr15:41792263(+) A-I      intronic chr15:41792258(+) A-I      intronic chr15:41792417(+) A-I      intronic chr15:41790185(+) A-I      intronic chr15:41789544(+) A-I      intronic chr15:41789607(+) A-I      intronic chr15:41789687(+) A-I      intronic chr15:41789623(+) A-I      intronic chr15:41789556(+) A-I      intronic chr15:41790164(+) A-I      intronic chr15:41789956(+) A-I      intronic chr15:41793050(+) A-I      intronic chr15:41792288(+) A-I      intronic chr15:41789527(+) A-I      intronic chr15:41792959(+) A-I      intronic chr15:41790190(+) A-I      intronic chr15:41789626(+) A-I      intronic chr15:41793060(+) A-I      intronic chr15:41789592(+) A-I      intronic chr15:41793110(+) A-I      intronic chr15:41792419(+) A-I      intronic chr15:41789688(+) A-I      intronic chr15:41789591(+) A-I      intronic chr15:41790039(+) A-I      intronic chr15:41789609(+) A-I      intronic chr15:41789702(+) A-I      intronic chr15:41792298(+) A-I      intronic chr15:41789635(+) A-I      intronic chr15:41793194(+) A-I      intronic chr15:41793139(+) A-I      intronic chr15:41789135(+) A-I      intronic chr15:41790203(+) A-I      intronic chr15:41790188(+) A-I      intronic chr15:41793070(+) A-I      intronic chr15:41790228(+) A-I      intronic chr15:41790174(+) A-I      intronic chr15:41790199(+) A-I      intronic chr15:41793030(+) A-I      intronic chr15:41792259(+) A-I      intronic chr15:41789962(+) A-I      intronic chr15:41793191(+) A-I      intronic chr15:41792950(+) A-I      intronic chr15:41790240(+) A-I      intronic chr15:41792388(+) A-I      intronic chr15:41790108(+) A-I      intronic chr15:41792431(+) A-I      intronic chr15:41793114(+) A-I      intronic chr15:41792191(+) A-I      intronic chr15:41792207(+) A-I      intronic chr15:41789661(+) A-I      intronic chr15:41792437(+) A-I      intronic chr15:41789606(+) A-I      intronic chr15:41792951(+) A-I      intronic chr15:41787873(+) A-I      intronic chr15:41790559(+) A-I      intronic chr15:41793086(+) A-I      intronic chr15:41789526(+) A-I      intronic chr15:41790244(+) A-I      intronic chr15:41790449(+) A-I      intronic chr15:41790036(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ITPKA	chr15:41793086(+) A-I intron -    21960545 chr15:41790228(+) A-G intron -    22484847 chr15:41792950(+) A-G intron -    22484847 chr15:41792951(+) A-G intron -    22484847 chr15:41793050(+) A-G intron -    22484847 chr15:41793060(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ITPKA	chr15:41785638-41785639(+) m6A 5'UTR       25456834 chr15:41785666-41785667(+) m6A CDS       25456834 chr15:41785678-41785679(+) m6A CDS       25456834 chr15:41786435-41786436(+) m6A CDS//intron       - chr15:41794250-41794251(+) m6A CDS//exon       24981863 chr15:41795235-41795236(+) m6A CDS//exon       24284625//24209618//22608085 chr15:41795266-41795267(+) m6A CDS//exon       24284625//24209618//22608085 chr15:41795323-41795324(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr15:41795370-41795371(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr15:41795406-41795407(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr15:41795444-41795445(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr15:41795487-41795488(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr15:41795658-41795659(+) m6A 3'UTR       24284625//24981863//22608085 chr15:41795685-41795686(+) m6A 3'UTR       24284625//24981863//22608085 chr15:41795717-41795718(+) m6A 3'UTR       24284625 chr15:41795735-41795736(+) m6A 3'UTR       24284625 chr15:41795743-41795744(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ITPKA	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H5
Interactor2: ITPKA

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg