Detail Information

Basic Information:


  VIRBase ID:  

VHID00199352

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H7-3p:           NXT2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H7-3p NXT2
miRBase
Accession/Entrez ID
MIMAT0015375 55916
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - P15-2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NXT2
chrX:108784087(+) A-I      intronic
chrX:108784088(+) A-I      intronic
chrX:108784077(+) A-I      intronic
chrX:108784131(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NXT2
chrX:108779145-108779146(+) m6A CDS       -
chrX:108780173-108780174(+) m6A 5'UTR//CDS       24981863
chrX:108780178-108780179(+) m6A 5'UTR//CDS       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H7-3p
Exosome K562 cells     24460325
NXT2
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H7-3p
Interactor2: NXT2

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...