Detail Information

Basic Information:


  VIRBase ID:  

VHID00197963

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:           PIP5KL1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H25 PIP5KL1
miRBase
Accession/Entrez ID
MIMAT0014708 138429
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - PIPKH

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PIP5KL1
chr9:130687830(-) A-I      intronic
chr9:130688664(-) A-I      intronic
chr9:130688652(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PIP5KL1
chr9:130683357-130683358(-) m6A 3'UTR//exon       25456834
chr9:130683672-130683673(-) m6A 3'UTR//exon       24284625//25456834//27371828
chr9:130683686-130683687(-) m6A 3'UTR//exon       24284625//25456834//27371828
chr9:130683812-130683813(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//22608085
chr9:130683818-130683819(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//22608085
chr9:130683851-130683852(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828
chr9:130683882-130683883(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828
chr9:130683939-130683940(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828
chr9:130684196-130684197(-) m6A CDS//exon       25456834//27371828
chr9:130684217-130684218(-) m6A CDS//exon       25456834//27371828
chr9:130689588-130689589(-) m6A 5'UTR//CDS//exon       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H25
Exosome K562 cells     24460325
PIP5KL1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H25
Interactor2: PIP5KL1

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

Starting a new search, please wait ...