Basic Information:

  VIRBase ID:  

VHID00197949

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:  MIMAT0014708          DEGS2:  NM_206918     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H25	DEGS2
miRBase Accession/Entrez ID	MIMAT0014708	123099
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C14orf66//DES2//FADS8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DEGS2	chr14:100623394(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DEGS2	chr14:100610307-100610308(-) m6A 3'UTR       - chr14:100610343-100610344(-) m6A 3'UTR       - chr14:100610391-100610392(-) m6A 3'UTR       - chr14:100610473-100610474(-) m6A 3'UTR       - chr14:100610516-100610517(-) m6A 3'UTR       - chr14:100610535-100610536(-) m6A 3'UTR       - chr14:100610541-100610542(-) m6A 3'UTR       - chr14:100610560-100610561(-) m6A 3'UTR       - chr14:100610567-100610568(-) m6A 3'UTR       - chr14:100611627-100611628(-) m6A 3'UTR       - chr14:100611684-100611685(-) m6A 3'UTR       - chr14:100612904-100612905(-) m6A 3'UTR       25456834//24981863//27371828 chr14:100612915-100612916(-) m6A 3'UTR       25456834//24981863//27371828 chr14:100613000-100613001(-) m6A 3'UTR       24981863//27371828 chr14:100613158-100613159(-) m6A 3'UTR//CDS       - chr14:100615740-100615741(-) m6A CDS//exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H25	Exosome K562 cells     24460325
	DEGS2	Chromatin K562 cells     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H25
Interactor2: DEGS2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg