Basic Information:

  VIRBase ID:  

VHID00197940

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:  MIMAT0014708          RNF166:  NM_001171815     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H25	RNF166
miRBase Accession/Entrez ID	MIMAT0014708	115992
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RNF166	chr16:88770470(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNF166	chr16:88763351-88763352(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr16:88763360-88763361(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr16:88763389-88763390(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr16:88763454-88763455(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085 chr16:88763515-88763516(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr16:88763603-88763604(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr16:88763643-88763644(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr16:88763699-88763700(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr16:88763882-88763883(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:88763979-88763980(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr16:88764039-88764040(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//27773535//27371828 chr16:88764094-88764095(-) m6A 3'UTR//intron       24284625//27773535//27371828 chr16:88764124-88764125(-) m6A 3'UTR//intron       24284625//27371828 chr16:88764177-88764178(-) m6A 3'UTR//intron       25456834//27371828 chr16:88764203-88764204(-) m6A 3'UTR//intron       25456834 chr16:88764233-88764234(-) m6A 3'UTR//intron       25456834 chr16:88764676-88764677(-) m6A 3'UTR//intron       25456834 chr16:88764682-88764683(-) m6A 3'UTR//intron       25456834 chr16:88764982-88764983(-) m6A CDS//intron       24284625 chr16:88765436-88765437(-) m6A CDS//intron       24284625//27773535 chr16:88766064-88766065(-) Y CDS       26075521 chr16:88766170-88766171(-) m6A 5'UTR//intron       24284625//27773535 chr16:88767273-88767274(-) m6A exon//intron       27371828 chr16:88767736-88767737(-) m6A 5'UTR//CDS//exon//intron       24284625//27371828//27773536 chr16:88767867-88767868(-) m6A exon//intron       27773536 chr16:88768572-88768573(-) Cm intron       - chr16:88772768-88772769(-) m6A 5'UTR       24209618//24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H25	Exosome K562 cells     24460325
	RNF166	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H25
Interactor2: RNF166

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg