Basic Information:

  VIRBase ID:  

VHID00197909

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:  MIMAT0014708          NEURL4:  NM_032442     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H25	NEURL4
miRBase Accession/Entrez ID	MIMAT0014708	84461
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NEURL4	chr17:7223625(-) A-I      intronic chr17:7223554(-) A-I      intronic chr17:7223225(-) A-I      intronic chr17:7223260(-) A-I      intronic chr17:7223662(-) A-I      intronic chr17:7223196(-) A-I      intronic chr17:7223201(-) A-I      intronic chr17:7223221(-) A-I      intronic chr17:7222891(-) A-I      intronic chr17:7222919(-) A-I      intronic chr17:7223589(-) A-I      intronic chr17:7223612(-) A-I      intronic chr17:7222763(-) A-I      intronic chr17:7222988(-) A-I      intronic chr17:7222897(-) A-I      intronic chr17:7223653(-) A-I      intronic chr17:7223636(-) A-I      intronic chr17:7231959(-) A-I      intronic chr17:7223590(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NEURL4	chr17:7218963-7218964(-) m6A 3'UTR       27773535 chr17:7219174-7219175(-) m6A 3'UTR       24284625//27773535 chr17:7219392-7219393(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr17:7219432-7219433(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:7219507-7219508(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773536//22575960 chr17:7219537-7219538(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773536//22575960 chr17:7219561-7219562(-) m6A 3'UTR//CDS//exon       24284625//25456834//27773536//22575960 chr17:7219637-7219638(-) m6A 3'UTR//CDS//exon       27773535 chr17:7221399-7221400(-) m6A 3'UTR//CDS//exon       - chr17:7221598-7221599(-) m6A 3'UTR//CDS//exon       27371828//27773536 chr17:7221613-7221614(-) m6A 3'UTR//CDS//exon       27371828//27773536 chr17:7221623-7221624(-) m6A 3'UTR//CDS//exon       27773536 chr17:7221835-7221836(-) m6A 3'UTR//CDS//exon       22575960 chr17:7221964-7221965(-) m6A CDS//exon       27773536 chr17:7222013-7222014(-) m6A exon//intron       27773536 chr17:7224482-7224483(-) m6A CDS       27773535//27773536 chr17:7224526-7224527(-) m6A CDS       27773535//27773536 chr17:7224894-7224895(-) m6A CDS//exon       24284625//24209618//24981863//27371828 chr17:7224906-7224907(-) m6A CDS//exon       24284625//24209618//24981863//27371828 chr17:7224964-7224965(-) m6A CDS//exon       24284625//24209618//27371828 chr17:7225025-7225026(-) m6A CDS//exon       24284625//24209618//27371828 chr17:7226830-7226831(-) m6A 3'UTR//CDS//exon       27773535 chr17:7226857-7226858(-) m6A 3'UTR//CDS//exon       27773535 chr17:7226991-7226992(-) m6A 3'UTR//CDS//exon       27773535 chr17:7227723-7227724(-) m6A 3'UTR//CDS       27773535 chr17:7227796-7227797(-) m6A CDS       27773535 chr17:7228607-7228608(-) m6A CDS//exon       27773536 chr17:7230249-7230250(-) m6A CDS//intron       24284625//27773535 chr17:7230773-7230774(-) m6A CDS       24284625//27371828 chr17:7230780-7230781(-) m6A CDS       24284625//27371828 chr17:7230796-7230797(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr17:7230904-7230905(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr17:7231015-7231016(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:7231033-7231034(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:7231039-7231040(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr17:7231141-7231142(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr17:7231156-7231157(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr17:7232394-7232395(-) m6A CDS       24284625//24209618//27371828//27773536 chr17:7232538-7232539(-) m6A CDS       25456834//27371828 chr17:7232583-7232584(-) m6A CDS       25456834//27371828 chr17:7232700-7232701(-) m6A 5'UTR       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H25	Exosome K562 cells     24460325
	NEURL4	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H25
Interactor2: NEURL4

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg