Basic Information:

  VIRBase ID:  

VHID00197896

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:  MIMAT0014708          TSSK6:  NM_032037     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H25	TSSK6
miRBase Accession/Entrez ID	MIMAT0014708	83983
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CT72//FKSG82//SSTK//TSSK4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TSSK6	chr19:19623545(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TSSK6	chr19:19623266-19623267(-) m6A 3'UTR       27773535 chr19:19623294-19623295(-) m6A 3'UTR       27773535 chr19:19623388-19623389(-) m6A intron       27773535 chr19:19624744-19624745(-) m6A intron       24284625//25456834//24981863//27773535//22608085 chr19:19624782-19624783(-) m6A intron       24284625//25456834//24981863//27773535//22608085 chr19:19624848-19624849(-) m6A intron       24284625//25456834//24981863//27773535//27371828//22608085 chr19:19624875-19624876(-) m6A intron       24284625//25456834//24981863//27773535//27371828//22608085 chr19:19624908-19624909(-) m6A intron       24284625//25456834//24981863//27773535//27371828//22608085 chr19:19624996-19624997(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr19:19625043-19625044(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr19:19625054-19625055(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr19:19625120-19625121(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr19:19625154-19625155(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr19:19625424-19625425(-) m6A CDS       27371828//27773536 chr19:19625589-19625590(-) m6A CDS       24284625//25456834 chr19:19625739-19625740(-) m6A CDS       24284625 chr19:19625981-19625982(-) m6A CDS       24284625 chr19:19626084-19626085(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr19:19626105-19626106(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr19:19626209-19626210(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr19:19626225-19626226(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr19:19626306-19626307(-) m6A 5'UTR       24284625//25456834//24981863//27371828//22608085 chr19:19626451-19626452(-) m6A 5'UTR       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H25	Exosome K562 cells     24460325
	TSSK6	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H25
Interactor2: TSSK6

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg