Basic Information:

  VIRBase ID:  

VHID00197847

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:  MIMAT0014708          MMP25:  NM_022468     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv2-miR-H25	MMP25
miRBase Accession/Entrez ID	MIMAT0014708	64386
Organism	Human alphaherpesvirus 2 (HSV2)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MMP-25//MMP20//MMP20A//MMPL1//MT-MMP 6//MT-MMP6//MT6-MMP//MT6MMP//MTMMP6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MMP25	chr16:3100726(+) A-I      intronic chr16:3098228(+) A-I      intronic chr16:3100892(+) A-I      intronic chr16:3100731(+) A-I      intronic chr16:3100812(+) A-I      intronic chr16:3100813(+) A-I      intronic chr16:3100814(+) A-I      intronic chr16:3100816(+) A-I      intronic chr16:3100893(+) A-I      intronic chr16:3100949(+) A-I      intronic chr16:3098123(+) A-I      intronic chr16:3100714(+) A-I      intronic chr16:3100925(+) A-I      intronic chr16:3100695(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MMP25	chr16:3097803(+) T-C intron -    22484847 chr16:3097804(+) T-C intron -    22484847 chr16:3100890(+) T-C intron -    22484847 chr16:3101087(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MMP25	chr16:3096728-3096729(+) m6A 5'UTR       25456834 chr16:3096761-3096762(+) m6A 5'UTR       25456834 chr16:3096887-3096888(+) m6A 5'UTR       25456834 chr16:3106056-3106057(+) m6A exon//intron       27773535 chr16:3106107-3106108(+) m6A exon//intron       27773535 chr16:3106136-3106137(+) m6A exon//intron       27773535 chr16:3106868-3106869(+) m6A exon//intron       24981863//27371828 chr16:3108875-3108876(+) m6A CDS       25456834//27371828 chr16:3108886-3108887(+) m6A CDS       25456834//27371828 chr16:3108929-3108930(+) m6A CDS       25456834//27371828 chr16:3108994-3108995(+) m6A CDS       25456834//24981863//27371828 chr16:3109116-3109117(+) m6A 3'UTR       25456834//24981863//27371828//27773536 chr16:3109121-3109122(+) m6A 3'UTR       25456834//24981863//27371828//27773536 chr16:3109156-3109157(+) m6A 3'UTR       25456834//24981863//27371828//27773536 chr16:3109226-3109227(+) m6A 3'UTR       25456834//24981863//27371828//27773536 chr16:3109270-3109271(+) m6A 3'UTR       25456834//24981863//27371828//27773536 chr16:3109312-3109313(+) m6A 3'UTR       25456834//24981863//27371828 chr16:3109332-3109333(+) m6A 3'UTR       25456834//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv2-miR-H25	Exosome K562 cells     24460325
	MMP25	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv2-miR-H25
Interactor2: MMP25

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg