Detail Information

Basic Information:


  VIRBase ID:  

VHID00197842

  Virus:  

Human alphaherpesvirus 2 (HSV2)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv2-miR-H25:           CIDEC:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv2-miR-H25 CIDEC
miRBase
Accession/Entrez ID		 MIMAT0014708 63924
Organism Human alphaherpesvirus 2 (HSV2) Homo sapiens
Category miRNA mRNA
Alias - CIDE-3//CIDE3//FPLD5//FSP27

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CIDEC
chr3:9909551(-) A-I      intronic
chr3:9911050(-) A-I      intronic
chr3:9916547(-) A-I      intronic
chr3:9917028(-) A-I      intronic
chr3:9918075(-) A-I      intronic
chr3:9909562(-) A-I      intronic
chr3:9909606(-) A-I      intronic
chr3:9910510(-) A-I      intronic
chr3:9910579(-) A-I      intronic
chr3:9910647(-) A-I      intronic
chr3:9910729(-) A-I      intronic
chr3:9911158(-) A-I      intronic
chr3:9911161(-) A-I      intronic
chr3:9912955(-) A-I      intronic
chr3:9912965(-) A-I      intronic
chr3:9913007(-) A-I      intronic
chr3:9910780(-) A-I      intronic
chr3:9910964(-) A-I      intronic
chr3:9911003(-) A-I      intronic
chr3:9911020(-) A-I      intronic
chr3:9911027(-) A-I      intronic
chr3:9913009(-) A-I      intronic
chr3:9913011(-) A-I      intronic
chr3:9913027(-) A-I      intronic
chr3:9915997(-) A-I      intronic
chr3:9913479(-) A-I      intronic
chr3:9912979(-) A-I      intronic
chr3:9912974(-) A-I      intronic
chr3:9912551(-) A-I      intronic
chr3:9912478(-) A-I      intronic
chr3:9912477(-) A-I      intronic
chr3:9912467(-) A-I      intronic
chr3:9911063(-) A-I      intronic
chr3:9909353(-) A-I      intronic
chr3:9911040(-) A-I      intronic
chr3:9911049(-) A-I      intronic
chr3:9913008(-) A-I      intronic
chr3:9909531(-) A-I      intronic
chr3:9911059(-) A-I      intronic
chr3:9911127(-) A-I      intronic
chr3:9911116(-) A-I      intronic
chr3:9909349(-) A-I      intronic
chr3:9910731(-) A-I      intronic
chr3:9909367(-) A-I      intronic
chr3:9909407(-) A-I      intronic
chr3:9909409(-) A-I      intronic
chr3:9909429(-) A-I      intronic
chr3:9909538(-) A-I      intronic
chr3:9909099(-) A-I      intronic
chr3:9909101(-) A-I      intronic
chr3:9909182(-) A-I      intronic
chr3:9910759(-) A-I      intronic
chr3:9909204(-) A-I      intronic
chr3:9909296(-) A-I      intronic
chr3:9909300(-) A-I      intronic
chr3:9911031(-) A-I      intronic
chr3:9912597(-) A-I      intronic
chr3:9909087(-) A-I      intronic
chr3:9909192(-) A-I      intronic
chr3:9913000(-) A-I      intronic
chr3:9912570(-) A-I      intronic
chr3:9909361(-) A-I      intronic
chr3:9909608(-) A-I      intronic
chr3:9911000(-) A-I      intronic
chr3:9910641(-) A-I      intronic
chr3:9912415(-) A-I      intronic
chr3:9910712(-) A-I      intronic
chr3:9909191(-) A-I      intronic
chr3:9909554(-) A-I      intronic
chr3:9909295(-) A-I      intronic
chr3:9909107(-) A-I      intronic
chr3:9916559(-) A-I      intronic
chr3:9909053(-) A-I      intronic
chr3:9913587(-) A-I      intronic
chr3:9909492(-) A-I      intronic
chr3:9911032(-) A-I      intronic
chr3:9909221(-) A-I      intronic
chr3:9909382(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CIDEC
chr3:9908662-9908663(-) m6A 3'UTR       27371828
chr3:9908689-9908690(-) m6A 3'UTR       27371828
chr3:9908718-9908719(-) m6A 3'UTR       -
chr3:9908781-9908782(-) m6A 3'UTR       -
chr3:9911749-9911750(-) m6A CDS//intron       27773535
chr3:9911850-9911851(-) m6A CDS//intron       27773535
chr3:9920468-9920469(-) m6A CDS//intron       -
chr3:9920631-9920632(-) m6A 5'UTR//intron       24981863
chr3:9920684-9920685(-) m6A 5'UTR//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv2-miR-H25
Exosome K562 cells     24460325
CIDEC
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv2-miR-H25
Interactor2: CIDEC

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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